Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip09g03821 | ATGTCCAATAATCCGCAATATCCGGGTTTACAGCCTCTTCGGCCTCCTGGACCTCCCATTGCTGGTTCACTGGATCCTCAGCGCAGTTTTGTTCCAGCTCCCATGCCTGGTCAATATCGCCCTGTAGTTCCTACTCAGCAGCCTCAACAGTTCATGCCCATGCCATCTCAACATTACCCTCCTGTTGGTCCCAGTGGTCCCATGATGAATGTTGGAATGCCTCCTCAAAATCAACAGCCCCAATTTCCTCAACCCATTCAACAGTTACCTCCAAGACCTGGCCAACAATTGCAACTCCCACCACAGCCGCAGCCACTTCCATTGTCAGTTGCTCGGCCAAACATGCACATGACATCTGAATCAATGATGCCGCAGCCTGATTCTCAAGTGCCAAATGGCTATGCACCAAGCTTAGGTGGCCCGGGAATGCCCCTTCCAGCATCATATACGTTTGGACCATCTTCTTATGGTCAAGTGCAAACTAATTTTAGCTCTGCTAGCCAATTCCACCCTGCTTCTCAAATCCAAGCTCCCTCTAGTTCTTCTTCCCAGAGCATTACCTCTGATACAGTTGTTCTGAGCAATGACGAGAAACCTTCAACTACATCTGTCACGCCTTCAGCAACTGGCATCCAGCCTTCACTTGCGAATGGTGGATCCACAGATTGGATTGAGCATACTTCTTCTAATGGAGTAAGATATTACTACAATAAGAAGACTAAAGTATCTAGCTGGGAGAGGCCTTTCGAATTGATGACCCCAATTGAGAGGGTGGATGCAACAACAAACTGGAAGGAGTATACTAGTCCTAATGGAATAAAGTATTACCACAACAAGGTCACTAGGGAATCAAAGTGGATGATTCCTGAGGAACTGAAGTTGGCCCGTCAGCAAGTTGAAAAGGCAGTTGCCAATGGAACACATACTGATGCTCTACCGAATTCTCATACTCAACCGTCTGTAACTCCTCCTGTGATTGAAACAGCACCAACTGCAGCAGCTAATTCATCTTTGATTGGTCAAGGGGAACCATCAAGTCCTGTTTCAGTTGCTCCTGTTGTTAGTGCATCTACAAGTCATCCACAATCTGAGATGAGTTCTGGACCATCTGCCTCTCCTCATGTGGCTCCCATAACTGGAATGACAGTGGCTGAAGTAGAGTTACCAGTAAATACTGCTACAATATCTGATGCTGCAGCAGGAAGTGATAGAGCTTCTGTTACCAATCAGAATGATGGCAACAACTTTCTGGTGAAGGATACACTGGGCTCTGCAGATGAAGTTCCAGCAGAAGATAAAGAAGATGGTAAAAATGATTCGTTAGTAGAAAAAACAAATGATGTGGCTTCAGAAACAAAGGCAGATACGGTTTCAGAAACAAGGGCTGATTTGGCTTCAGAAACACAGGCAAATGTGGCTTTGGAAACAAAGGCAGATGCATCTTCAGAAACAAAAACACGTGAACCATTACCCTTAGTTTATGCAAATAAGATGGAGGCTAAAGAAGCATTCAAAGCACTGATAGAGTCTGTAAATGTTGGATCTGACTGGACATGGGATCGAACTATGCGATTAATAGTTAATGACAAAAGGTACGGTGCATTAAAATCGCTTGGAGAAAAGAAGCAAGCTTTCAATGAGTACTTAAGTCAGAGGAAAAAACAGGAAGCAGAAGAAAAGCGCATGAAGCATAAAAAAGCACGAGAGGATTTTAAAAAGATGTTAGAAGAGTCCACGGAGTTGAATCCATCCACTAGATGGAGCAAAGCCGTGACAATATTTGAAAATGATGAACGTTTCAAGGCTGTTGAGCGTGACAGAGATCGCAGGGATATGTTTGATAGTTTCTTGGAGGAACTTATAAACAAGGAACGAGCAAAGGCTCAAGAAGAACGGAAGAGGAATATAACAGAGTACAGGAAGCTTTTAGAATCTTGTGACTTTATAAAAGCTAACACACAGTGGCGAAAAGTTCAAGACCGCTTAGAGGCTGACGAAAGATGTTCGCGTCTTGAGAAAATTGACCGTTTGGAAATATTCCAGGACTATTTACGTGATTTAGAGAAGGAAGAGGAAGAGCAGAAGAAGTTACTAAAGGAGGAATTGAGAAAGACAGAACGTAAAAACCGTGATGAATTCCGCAAATTGATGGAAGAGCATGTTGCTGCTGGCATTCTTACAGCAAAAACTCATTGGCGTGATTATCACATGAAGGTGAAAGATTTACCTGCATATCTAGCAGTGGCATCAAACACATCAGGCTCAACTGCAAAAGACTTATTTGAAGATGTTGCTGAAGAGCTAGAGAAACAATATCATGATGAAAAGAGTCGAATTAAGGATGCGGTGAAGTTGGCTAAGATAACATGGTCATCAACCTATACTTTTGAAGAGTTCAAATCAGCTTTATCTATTGACTCTCCTCCAATATCTGATTTTAACTTAAAGCTAGTGTTTGATGAGCTACTAGAGCGGGCTAAGGAGAAGGAAGAAAAGGAGGCCAAAAAACGGAAACGTCTAGCAGATGATTTCCTTCATTTACTATATTCTACTAAGGACATTACTGCATCTTCAAAATGGGAAGATTGTATAACACTTATTGAAGATAGTCAAGAGTTCAGATCTGTTGGAGATGATAACCGTTGCAAGGAAATATTTGAGGAGTACATTACACAACTGAAAGAACAGGCAAAAGAGGGTGAGCGGAAACGGAAAGAGGAGAGGGCAAAGAAGGAAAAGGATAGGGAGGAAAAAGAAAGACGAAAATCTAAGCAAAGAAGGGAAAAAGAAGGAGTTCGCGAAAGAGAGAAAGATAAAGCAGACAGTGACAGTGCCGACTTAACGGAGAAAGGCGATAGTAAAAACAAACGGAGGCAGCATCAAAGTCCTGAGCACACTTCTCATGAATTGGATAAAGAGAGGAGTAAGAAATCTCATGGGCATAGTAGCAGCGACAGGAAGAAATCGAAACGACATTCATCTGGTCATGAATCAGATGAAGGCCGGCATAAAAGACACAAGCGCGACCACCGCGGTGATCCTCACAGAGAAGGTGGTTATGCGGAGGCGGAAGACGATGACTATGGTAAAGATGTTGATAGATGGTAA | 3108 | 0.4302 | MSNNPQYPGLQPLRPPGPPIAGSLDPQRSFVPAPMPGQYRPVVPTQQPQQFMPMPSQHYPPVGPSGPMMNVGMPPQNQQPQFPQPIQQLPPRPGQQLQLPPQPQPLPLSVARPNMHMTSESMMPQPDSQVPNGYAPSLGGPGMPLPASYTFGPSSYGQVQTNFSSASQFHPASQIQAPSSSSSQSITSDTVVLSNDEKPSTTSVTPSATGIQPSLANGGSTDWIEHTSSNGVRYYYNKKTKVSSWERPFELMTPIERVDATTNWKEYTSPNGIKYYHNKVTRESKWMIPEELKLARQQVEKAVANGTHTDALPNSHTQPSVTPPVIETAPTAAANSSLIGQGEPSSPVSVAPVVSASTSHPQSEMSSGPSASPHVAPITGMTVAEVELPVNTATISDAAAGSDRASVTNQNDGNNFLVKDTLGSADEVPAEDKEDGKNDSLVEKTNDVASETKADTVSETRADLASETQANVALETKADASSETKTREPLPLVYANKMEAKEAFKALIESVNVGSDWTWDRTMRLIVNDKRYGALKSLGEKKQAFNEYLSQRKKQEAEEKRMKHKKAREDFKKMLEESTELNPSTRWSKAVTIFENDERFKAVERDRDRRDMFDSFLEELINKERAKAQEERKRNITEYRKLLESCDFIKANTQWRKVQDRLEADERCSRLEKIDRLEIFQDYLRDLEKEEEEQKKLLKEELRKTERKNRDEFRKLMEEHVAAGILTAKTHWRDYHMKVKDLPAYLAVASNTSGSTAKDLFEDVAEELEKQYHDEKSRIKDAVKLAKITWSSTYTFEEFKSALSIDSPPISDFNLKLVFDELLERAKEKEEKEAKKRKRLADDFLHLLYSTKDITASSKWEDCITLIEDSQEFRSVGDDNRCKEIFEEYITQLKEQAKEGERKRKEERAKKEKDREEKERRKSKQRREKEGVREREKDKADSDSADLTEKGDSKNKRRQHQSPEHTSHELDKERSKKSHGHSSSDRKKSKRHSSGHESDEGRHKRHKRDHRGDPHREGGYAEAEDDDYGKDVDRW | 1035 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 896 | 1035 | - | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 461 | 479 | - | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 399 | 418 | - | - | |
| Aip09g03821 | 1035 | ProSiteProfiles | FF domain profile. | 704 | 767 | IPR002713 | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 425 | 460 | - | - | |
| Aip09g03821 | 1035 | SMART | FF_2 | 497 | 551 | IPR002713 | - | |
| Aip09g03821 | 1035 | SMART | FF_2 | 706 | 767 | IPR002713 | - | |
| Aip09g03821 | 1035 | SMART | FF_2 | 564 | 619 | IPR002713 | - | |
| Aip09g03821 | 1035 | SMART | FF_2 | 632 | 686 | IPR002713 | - | |
| Aip09g03821 | 1035 | SMART | FF_2 | 837 | 892 | IPR002713 | - | |
| Aip09g03821 | 1035 | ProSiteProfiles | FF domain profile. | 563 | 619 | IPR002713 | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 336 | 373 | - | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | WW domain | 251 | 292 | IPR036020 | GO:0005515 | |
| Aip09g03821 | 1035 | Gene3D | FF domain | 830 | 904 | IPR036517 | - | |
| Aip09g03821 | 1035 | ProSiteProfiles | FF domain profile. | 632 | 686 | IPR002713 | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 990 | 1035 | - | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | FF domain | 624 | 693 | IPR036517 | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | FF domain | 558 | 625 | IPR036517 | - | |
| Aip09g03821 | 1035 | Coils | Coil | 758 | 785 | - | - | |
| Aip09g03821 | 1035 | Gene3D | FF domain | 497 | 552 | IPR036517 | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | WW domain | 222 | 256 | IPR036020 | GO:0005515 | |
| Aip09g03821 | 1035 | Coils | Coil | 550 | 577 | - | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 896 | 980 | - | - | |
| Aip09g03821 | 1035 | ProSiteProfiles | FF domain profile. | 497 | 551 | IPR002713 | - | |
| Aip09g03821 | 1035 | Gene3D | - | 198 | 257 | - | - | |
| Aip09g03821 | 1035 | Gene3D | - | 258 | 315 | - | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | FF domain | 494 | 552 | IPR036517 | - | |
| Aip09g03821 | 1035 | SMART | ww_5 | 218 | 250 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | SMART | ww_5 | 259 | 291 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | PANTHER | PRE-MRNA-PROCESSING PROTEIN 40B | 2 | 1028 | - | - | |
| Aip09g03821 | 1035 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 217 | 250 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 1 | 222 | - | - | |
| Aip09g03821 | 1035 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 258 | 291 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | ProSitePatterns | WW/rsp5/WWP domain signature. | 223 | 248 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | Coils | Coil | 819 | 843 | - | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 336 | 376 | - | - | |
| Aip09g03821 | 1035 | Pfam | FF domain | 566 | 614 | IPR002713 | - | |
| Aip09g03821 | 1035 | Pfam | FF domain | 499 | 548 | IPR002713 | - | |
| Aip09g03821 | 1035 | Pfam | FF domain | 708 | 763 | IPR002713 | - | |
| Aip09g03821 | 1035 | Pfam | FF domain | 842 | 889 | IPR002713 | - | |
| Aip09g03821 | 1035 | Pfam | FF domain | 636 | 683 | IPR002713 | - | |
| Aip09g03821 | 1035 | PANTHER | PRE-MRNA-PROCESSING PROTEIN PRP40 | 2 | 1028 | IPR039726 | GO:0045292 | |
| Aip09g03821 | 1035 | CDD | WW | 262 | 291 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | Coils | Coil | 883 | 935 | - | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 114 | 132 | - | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | FF domain | 830 | 899 | IPR036517 | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 78 | 108 | - | - | |
| Aip09g03821 | 1035 | SUPERFAMILY | FF domain | 699 | 774 | IPR036517 | - | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 399 | 486 | - | - | |
| Aip09g03821 | 1035 | Pfam | WW domain | 222 | 248 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | Pfam | WW domain | 263 | 287 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | CDD | WW | 221 | 248 | IPR001202 | GO:0005515 | |
| Aip09g03821 | 1035 | MobiDBLite | consensus disorder prediction | 151 | 222 | - | - | |
| Aip09g03821 | 1035 | Gene3D | FF domain | 697 | 778 | IPR036517 | - | |
| Aip09g03821 | 1035 | Gene3D | FF domain | 626 | 696 | IPR036517 | - | |
| Aip09g03821 | 1035 | Gene3D | FF domain | 553 | 625 | IPR036517 | - | |
| Aip09g03821 | 1035 | Coils | Coil | 677 | 719 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip09g03821 | Aip-Chr9 | 144816411 | 144826464 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip09g03821 | K12821 | - | gmx:100796870 | 1186.4 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip09g03821 | 09 | 144816411 | 144826464 | Aip09g03821 | 09 | 144816411 | 144826464 | ECH |