Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03819 ATGCAAATGTTGCAAACCCTAGCACCCGCAAGGGCAGCAAAACCCTGTTTCATGGTGAATACATCATTGGCATGGCTACGAAACTTGAAAGCGAGAGTGAGAGTGCGTGCATTCTCTTTCTCCTCCTCCTCCTCCGACGATTACGGAGACCAATCACGCGGTGGCCTCCCCCGCTTCTACTCCGAAACTTTTCCTTCTTCCAAGGGTAGTGTTGTGCGTGTAAAAGGTGATGAATTTTGGCATATGACAAAAGTATTGAGGCTGGGTGCCGATGACAGGGTAGAGCTCTTCAACGGGAAGGGAGGTCTGGTAGAAGGATGCATACAGAACATTGATCGCACTGGACTTGATTTTGTTGCACTGAATGATCCAAAGCTAATACATCCACAGAACATGCAGTTGCATGTATTTGCTGGTTTTGGAACTTTGAAGGGTGGACGTGCTGACTGGCTTGTAGAGAAGTGCACAGAACTTGGAGCCAATAGTGTAACTCCACTACTTACTGAACGTTCTCCATCAATCTCAGAAAATCGGGTAGACAGATTGGAACGGGTAATCTTAGCGGCATCAAAACAATGTCAACGGCTGCATGAAATGGTCCTGAAACCTCCTGTAAAGGTTAATGACCTTCTCCATCTTATTGCACAGTCAAAGCTTTCTCTTGTTGCAACAGCAAAGGCATCTCCTGTTCTTAATGCATTGACAGAATTCAAAAAAGAAACTAGTGGCTTAATCGTAATTGGACCTGAAGGCGACTTCACCGAGAAAGAAGAGAGTATGATGATGGAAGCGGGTGCCATAGGTGTTAGTCTCGGGCCACATCGTCTAAGGGTTGAAACCGCCACAATAGCACTTCTATCAACTCTCATGTTATGGTCTGACTCTCACCGAAGCTAA 897 0.4604 MQMLQTLAPARAAKPCFMVNTSLAWLRNLKARVRVRAFSFSSSSSDDYGDQSRGGLPRFYSETFPSSKGSVVRVKGDEFWHMTKVLRLGADDRVELFNGKGGLVEGCIQNIDRTGLDFVALNDPKLIHPQNMQLHVFAGFGTLKGGRADWLVEKCTELGANSVTPLLTERSPSISENRVDRLERVILAASKQCQRLHEMVLKPPVKVNDLLHLIAQSKLSLVATAKASPVLNALTEFKKETSGLIVIGPEGDFTEKEESMMMEAGAIGVSLGPHRLRVETATIALLSTLMLWSDSHRS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03819 298 Pfam RNA methyltransferase PUA domain 75 119 IPR046887 -
Aip09g03819 298 Gene3D - 55 297 IPR029026 -
Aip09g03819 298 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 56 297 IPR006700 GO:0006364|GO:0008168
Aip09g03819 298 TIGRFAM TIGR00046: RNA methyltransferase, RsmE family 70 290 IPR006700 GO:0006364|GO:0008168
Aip09g03819 298 Pfam RNA methyltransferase domain 133 289 IPR046886 -
Aip09g03819 298 SUPERFAMILY alpha/beta knot 132 293 IPR029028 -
Aip09g03819 298 CDD RsmE-like 134 287 IPR046886 -
Aip09g03819 298 SUPERFAMILY PUA domain-like 59 118 IPR015947 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03819 K09761 - gmx:100777253 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03819 09 144801996 144804544 Aip09g03819 09 144801996 144804544 ECH