Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03806 ATGAAGCAGTGTGTGGCAGAAACACCAAGAGCACAGTATGGTGGAGGCATTATAATAAATCCAGGATTTGATCACAGCATAGATGGTTGGACAGTATTCGAAAATGGTTCTATCGAGGAACGAATATCCAATGCAGGCAATAGATTCATTGTTGTGGGAAACAGGACTCAACCATCAGATAGTTTCTCCCAGAAGGTCCAACTTAAGAAAGGAATGCTATACAACTTTACTGCTTGGTTTCAGCTCAGTGAAGGAAGTGACACTGTATCAGTTATATTTAAAACGAATGCAACTGAGCTGATTCGAGGAGGCCACGTGGTAGCAAAGCATGGATGCTGGACTCTGCTAAAAGGTGGCATACTTACCAACTACTCAAGCCCTGCTGAGATTTTTTTTGAGACCAAGAACTCAAAGCTGGAAATATGGGCTGATAGTGTTTCCTTGCAACCATTTACCAAAGAGCAATGGAGATCACATCAAGATGAAAGCATTGAGACGGTACGTAAGAGCAAGCCTAAATGGGTCAAGTCCTTATCTTCTGATGAGTTAAGGGAAGCAGTAGAAACAAGAATAAATTCTGTGGTTTCAAGGCATGAAGGTGAACTCATTGCATGGGATGTGGTGAATGAGAATCTCCACTTCAGCTTCTTTGAGGACAATCTTGGTAAAAATGCTTCTGCAGAGTATTTTTCTAAAACTTACCAGCTTGATCCAAAACCATTATTGTTCACGAATGAGTATAACACTATTGAATATAGTGGTGATAGAGCTCCCAGCCCAGCCAATTATATTGCGAAAATGACGAAGATTCGGTCATTTCCAGGAAATGAAGGAATATCAGCAGCAATAGGGCTGCAAGGCCATTTCACTGCTGGCCAGCCAAATCTTACTTACATGAGAGCTTCTCTTGATGCTTTTGATACTACTTCACTTCCAATATGGCTCACAGAAGTGAGTGTGGATTCAGATCCAAATCAGGCAGAGCACTTGGAAGAAATTCTAAGAGAAGAATACTCTCATCCTTCTGTTGAAGGGATCATCATGTTTGTCGGTCCGGCAATAGCTGCAGGTTTCAAGGACATGGCTCTCACTGATGAGAATTTTCAGAATACTCCGGCCGGTGACGTTGTGGACAAGCTCATCAGTGAGTGGCAAACTGAGCCTCAGAAAGCCATAGCAGACAGCACTGGATTTATACATTTTTCACTGCATCATGGAGATTATGATGTAACTGTGACACATCCTCTTGGCCACTCCTCAAAAACACTGAATCTAAGTTCGTCGTTGCCACTGGAGTTGAACTGTTCCTGTCATTATCCCGATTTCCGGGACTATCGCCAGCTCCATTTtgtcgctactccggtctaa 1368 0.4203 MKQCVAETPRAQYGGGIIINPGFDHSIDGWTVFENGSIEERISNAGNRFIVVGNRTQPSDSFSQKVQLKKGMLYNFTAWFQLSEGSDTVSVIFKTNATELIRGGHVVAKHGCWTLLKGGILTNYSSPAEIFFETKNSKLEIWADSVSLQPFTKEQWRSHQDESIETVRKSKPKWVKSLSSDELREAVETRINSVVSRHEGELIAWDVVNENLHFSFFEDNLGKNASAEYFSKTYQLDPKPLLFTNEYNTIEYSGDRAPSPANYIAKMTKIRSFPGNEGISAAIGLQGHFTAGQPNLTYMRASLDAFDTTSLPIWLTEVSVDSDPNQAEHLEEILREEYSHPSVEGIIMFVGPAIAAGFKDMALTDENFQNTPAGDVVDKLISEWQTEPQKAIADSTGFIHFSLHHGDYDVTVTHPLGHSSKTLNLSSSLPLELNCSCHYPDFRDYRQLHFVATPV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03806 455 PANTHER GLYCOSYL HYDROLASE 2 171 IPR044846 GO:0004553|GO:0005975
Aip09g03806 455 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 2 171 - -
Aip09g03806 455 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 170 424 - -
Aip09g03806 455 SUPERFAMILY (Trans)glycosidases 171 387 IPR017853 -
Aip09g03806 455 SMART glyco_10 147 380 IPR001000 GO:0004553|GO:0005975
Aip09g03806 455 Pfam Carbohydrate binding domain 16 132 IPR003305 GO:0016798
Aip09g03806 455 Pfam Glycosyl hydrolase family 10 171 329 IPR001000 GO:0004553|GO:0005975
Aip09g03806 455 PANTHER GLYCOSYL HYDROLASE 170 424 IPR044846 GO:0004553|GO:0005975
Aip09g03806 455 SUPERFAMILY Galactose-binding domain-like 14 150 IPR008979 -
Aip09g03806 455 Gene3D - 6 151 - -
Aip09g03806 455 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 1 380 IPR001000 GO:0004553|GO:0005975
Aip09g03806 455 Gene3D Glycosidases 156 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03806 Aip-Chr9 144742185 144745529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03806 171 433 Glycoside Hydrolase AT2G14690 46.739 6.90e-78 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03806 - - gmx:100802367 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03806 09 144742185 144745529 Aip09g03806 09 144742185 144745529 ECH