Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03802 ATGAAGAAGCTTCGGAGATCAACGCTGGCGCTGTTTTTAGGGTTTCTGTTGCTGTCGGTGGCGCCGTCGTCAATGGGGAGATTCGTGGTGGAGAAGAATAGCTTGACGGTCTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCGGATGATATTGATGAAAACTTGATAACTATGGACACACCTGAGGAGGATGGATCATCTGCAAAATACATAGAGAACATAACAATACCATCAGCTCTCATTGAAAAAAGTTTTGGTATAAAATTAAAGGATGCCATAAGTGGTGGTGATATGGTCAATGTAAATCTTGATTGGAGAGAGGCTGTTCCCCACCCAGATGACCGCGTGGAGTATGAGTTGTGGACCAACAGCAATGATGAATGCGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCTGCACAGATACTTGAAAAAGGTGGTTATACTCAGTTTACACCCCATTATATAACTTGGTACTGTCCTCAGGCGTTCACATTAAGCAAACAGTGCAAGTCTCAGTGCATCAATCACGGAAGATATTGTGCTCCAGATCCTGAGCAGGACTTCAGCACTGGTTATGACGGGAAAGATGTGGTTATTGAAAACTTAAGGCAGCTTTGCGTTTTTAAGGTGGCAAATGAAACTAAAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAAATTAGATGTCCGATGAAGGAGAAAAAATACAATAAGGAGTGTGCTGATGCTGTCATTAAGTCACTTGGTCTTGATCTCAAAAAGATTGAGAAGTGCATGGGAGATCCTGATGCTGATTCTGACAATCCTGTTTTGAAGGAAGAGCAAGATGCACAGGTTGGAAAGGGTTCCAGAGGTGATGTCACCATATTGCCGACTCTTGTTGTCAATAATCGACAGTATCGAGGAAAACTGGAAAAAGGGGCTGTCATGAAAGCTATATGCTCTGGGTTTGAAGAAACTACTGAACCAGGCGTCTGTTTGAGCAGTGATGTGGAGACAAATGAGTGTTTGGATAACAACGGTGGTTGTTGGCGGGATAAAGCAGCTAACATCACTGCATGCAAGGATACATTCCGCGGCCGAGTATGCGAATGCCCCCTTGTGGATGGCGTGCAGTTCAAAGGAGATGGTTATACAACCTGTGAAGCCAGTGGACCTGGGCGGTGCAAGATAAATAATGGGGGTTGTTGGCATGATGCCCGTAATGGACACGCGTTTTCTGCTTGTTTGGATGATGGACATGTTAAATGCCAGTGTCCTGCAGGGTTTAAGGGTGATGGTGTCAAAAACTGTGATGACATAGATGAATGCGGAGATAAGAAAGCTTGTCAGTGCCCTGAATGTACCTGCAAGAATACCTGGGGCAGCTATGACTGCAGTTGCAGTGGAGACCTTCTGTATATCAGGGACCATGATGCCTGCATAAGTAAAACTGCGAGTCAGGGAGGGAAGTCTGTTTGGGCTGCATTTTGGGTCATTTTACTTGGCTTGCTTCTAACTGCTGCTGGCGCATACCTAGTGTACAAATATAGAATAAGGTCATACATGGATTCTGAAATCAGAGCCATCATGGCACAGTACATGCCCCTGGACAGCCAAGGGGAAGTAGTAAACCATGTCAACGATGAAAGAGCATGA 1674 0.4492 MKKLRRSTLALFLGFLLLSVAPSSMGRFVVEKNSLTVWNAQKAGASAVLVADDIDENLITMDTPEEDGSSAKYIENITIPSALIEKSFGIKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADAVIKSLGLDLKKIEKCMGDPDADSDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICSGFEETTEPGVCLSSDVETNECLDNNGGCWRDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHDARNGHAFSACLDDGHVKCQCPAGFKGDGVKNCDDIDECGDKKACQCPECTCKNTWGSYDCSCSGDLLYIRDHDACISKTASQGGKSVWAAFWVILLGLLLTAAGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQGEVVNHVNDERA 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03802 557 CDD EGF_CA 445 473 - -
Aip09g03802 557 Pfam PA domain 35 90 IPR003137 -
Aip09g03802 557 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 35 536 - -
Aip09g03802 557 ProSitePatterns EGF-like domain signature 2. 429 443 IPR000742 -
Aip09g03802 557 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 35 536 - -
Aip09g03802 557 Gene3D Laminin 399 479 - -
Aip09g03802 557 Gene3D Laminin 338 394 - -
Aip09g03802 557 Pfam Complement Clr-like EGF-like 427 448 IPR026823 -
Aip09g03802 557 Gene3D - 31 115 - -
Aip09g03802 557 SMART egfca_6 445 487 IPR001881 GO:0005509
Aip09g03802 557 ProSitePatterns Calcium-binding EGF-like domain signature. 445 471 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03802 Aip-Chr9 144724184 144727738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03802 34 557 Miscellaneous Gene Families AT2G14740 85.496 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03802 - - gmx:100776184 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03802 09 144724184 144727738 Aip09g03802 09 144724184 144727738 ECH