Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03794 ATGAAGTTCATGAAACTTGGTTCTAAGCCAGATACCTTTCAGACTGATGGGAACAATGTCAGGTATGTGGCCAGTGAGTTGGTATCAGATATCATTGTTAGTGTTGGGGATGTAAAGTTTTATTTACATAAGTTCCCTCTTCTATCAAAGAGTGCTCGCTTACAGAAGATGATCTCCCTCAGTAATGAAGAAAATGTAGATGATGTCCAAATTGGTGACATTCCGGGAGGCGCAAGTGCCTTCGAGATATGTGCTAAGTTCTGCTATGGGATGACTGTTACCCTGAATGCTTACAATGTAATAGCAACTCGGTGTGCAGCAGAGTACCTTGGAATGCATGAGACAATTGAGAAAGGAAACCTCATTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTTTCCGTAGTTGGAAGGATTCGATCATACTTCTTCAGACTTCAAAGTCTATGCTACCATTGGCTGAGGACTTAAAGGTGGTGAGCCATTGCATTGAATCTATAGCCAACAAGGCATGTGTTGATGTATCAAAAGTTGACTGGTCTTACTCCTACAACCGGAGAAAGCTTCCGGAGGAAAATGGAATCGATTCAGATCCGAACGAAATCAGAACTCGGCTAGTACCAAAAGACTGGTGGGTTGAAGATCTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTAATTACAAGTATTAAAAGCAAGGGAGTTCAGCCTAATGAGGTAATTGGTGAAGCTTTGAAAGCTTATGCTTACAGAAGATTACCAAGTTTCACCAAGGGAATGATCCCCTGTGGAGACATATCAAAGCAACGGCTAATAGTCGAAACAATCCTATGGTTGTTACCTACTGAGAAAGGCAGCATCTCTTGTAGGTTCTTACTCAAGTTGTTAAAAGCTGCCATTTTCGTAGAGTTAGGAGATAAGGCTAAAGAAGAGCTTGTAAGGAGAATTGGGCAGCAACTGGAGGAGGCTTCTGTTAGTGATATTTTGATTCGAGCACCGGATAGAGAAACTACAATCTATGATGTCAGTATAGTCCAGAAAATTTTAAGAGAGTTCTTCATGAAAAATCACAACACTGAGATTGAATCAATAGGTGCTGGTGAGCTTGTGGGGATAAGAAATCCCGGGATTTTATCTGATGCTTCCAAGCTTATGGTTGCAAAACTCATAGATGGATACCTTGCCGAAGTTGCAAAGGATCCCAATTTACCTTTGTCAGATTTTGTTGATCTTGCTGATCTAGTGTCGAGCATCTCTCGTCCTACTCACGATGGCCTTTACAGGGCCATCGACACGTATCTTAAGGAGCACCCTGGGATCAGCAAAGGTGACAAAAAGAGGATTTGCAAACTAATGGATTGCAGAAAACTGTCTGTTGATGCCTGCATGCATGCAGTGCAAAATGAGAGGCTACCATTGAGAGTTGTTGTGCAGGTACTTTACTTTGAGCAGGTAAGGAGTGCTGCATCATCCGGTACCAGCACGCCCGACATACCTAAAGGACACAAGGATTTGAGCAATGTATCTAATGCTAGCTCGAGGTCCGGGACAACCAATCCGGAAGACGAATTGGATGCTGTGGCCACAGCTGAGGAGCTGAAGGCCTTAAGAAGGGAACTTGCATCATTGAGGATGAGCAATGGTAATGGTGGTGGTGGTAATGAGAAAGATGTAGATATCAAACCAAACATGGACAAAGCTGTGATTGGAAAGATGAAAGGGTTGCTCAGGTCAAAGAAGTCATTCATAAAGAAATGGGCCAGCAAAGGAGGACAAGGTGAAAATAGTGGCTCTGATTCATCAGATAGTATTGGTTCTGCTAATCCAGAAGAAGTTAAATCCACTCCATCCAGAAATAGGAGGCATTCAGTTTCATGA 1881 0.4242 MKFMKLGSKPDTFQTDGNNVRYVASELVSDIIVSVGDVKFYLHKFPLLSKSARLQKMISLSNEENVDDVQIGDIPGGASAFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMHETIEKGNLIYKIDVFLSSSIFRSWKDSIILLQTSKSMLPLAEDLKVVSHCIESIANKACVDVSKVDWSYSYNRRKLPEENGIDSDPNEIRTRLVPKDWWVEDLCELEVDLYKSVITSIKSKGVQPNEVIGEALKAYAYRRLPSFTKGMIPCGDISKQRLIVETILWLLPTEKGSISCRFLLKLLKAAIFVELGDKAKEELVRRIGQQLEEASVSDILIRAPDRETTIYDVSIVQKILREFFMKNHNTEIESIGAGELVGIRNPGILSDASKLMVAKLIDGYLAEVAKDPNLPLSDFVDLADLVSSISRPTHDGLYRAIDTYLKEHPGISKGDKKRICKLMDCRKLSVDACMHAVQNERLPLRVVVQVLYFEQVRSAASSGTSTPDIPKGHKDLSNVSNASSRSGTTNPEDELDAVATAEELKALRRELASLRMSNGNGGGGNEKDVDIKPNMDKAVIGKMKGLLRSKKSFIKKWASKGGQGENSGSDSSDSIGSANPEEVKSTPSRNRRHSVS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03794 626 Pfam BTB/POZ domain 25 118 IPR000210 GO:0005515
Aip09g03794 626 MobiDBLite consensus disorder prediction 491 525 - -
Aip09g03794 626 PANTHER OS12G0117600 PROTEIN 1 623 IPR043454 -
Aip09g03794 626 SUPERFAMILY POZ domain 21 117 IPR011333 -
Aip09g03794 626 CDD BTB_POZ_NPY3-like 20 124 - -
Aip09g03794 626 MobiDBLite consensus disorder prediction 506 523 - -
Aip09g03794 626 Pfam NPH3 family 210 463 IPR027356 -
Aip09g03794 626 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Aip09g03794 626 MobiDBLite consensus disorder prediction 587 626 - -
Aip09g03794 626 Gene3D Potassium Channel Kv1.1; Chain A 8 121 IPR011333 -
Aip09g03794 626 Coils Coil 527 547 - -
Aip09g03794 626 MobiDBLite consensus disorder prediction 592 614 - -
Aip09g03794 626 ProSiteProfiles NPH3 domain profile. 210 487 IPR027356 -
Aip09g03794 626 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 623 IPR029960 GO:0009958
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03794 Aip-Chr9 144677206 144682097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03794 8 503 EF-hand Containing Proteins AT3G44820 36.158 1.40e-102 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03794 - - gmx:100807318 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03794 09 144677206 144682097 Aip09g03794 09 144677206 144682097 ECH