Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03747 ATGTTCACTTCTCACTTGCGTTGTGTTGCAGATGCTGCTTGTGTTTTCACTCCACCTCCAAAGCATTTTGCCACTTCTCGCCTTGCTCTTTCGAATTTGGTTCCAACTCGAGCATCCTTTGTTGCTGGTTCCCCACTCTTGATTCAAACAAGTTATGAAAGGAAAACCATATGCAAGGCAATGCCAGTTTCAATAAAGTGCGAGCAAAGTTCGCAGGGAGGGAACAGTGTGGATGTATGGCTAGGCCGGCTAGCCATGGTTGGCTTTGCGTCGGCCATCACTGTTGAAATTGCTACTGGCAAGGGTCTCCTTGAGAATTTTGGAGTTACAGCTCCACTGCCTACAGTTGCCTTGGCAGTAACAGGACTGGTGATGTCTCGGTTGGCAAAGAGGTTCTTACCAAAGTATGAATGGAGGATCCCAATGGTGGGTCTTGATTCTTCAGGGAAGACTACCATTCTCTACAAGCTCAAACTGGGGGACACAGTCAGAACCATACCAACTATTGGTTTTAATGTGGAGAGTGTAGAGTACAAAAATGCAAGCTTTACTATCTGGGATGTTGGAGGACAACAGAAGATTCGGCCATTGTGGAGGCATTACTTTCAAAACACCATTGGACTTATCTTTGTGGTGGATAGCAGTGACCGGCACAGAATCATAGAAGCTCGTAATGAACTCCATAATATTCTAACTGATCATGAACTACGCAATGCTATACTACTTGTGTTCGCCAATAAGCAGGACCTCTCAACTGCCATGAGTGTTGCTGAGATTGCTGATAAGCTTGGCTTACATTCGCTTGAAGATCGTAGTTGGTACATTCAGAGCACTTCTGCCATCTCAGGCCAAGGACTCTATCAAGGTCTTGATTGGCTACTTGACAACATATCAACTAGGAAGCATGAGAAATGA 915 0.4514 MFTSHLRCVADAACVFTPPPKHFATSRLALSNLVPTRASFVAGSPLLIQTSYERKTICKAMPVSIKCEQSSQGGNSVDVWLGRLAMVGFASAITVEIATGKGLLENFGVTAPLPTVALAVTGLVMSRLAKRFLPKYEWRIPMVGLDSSGKTTILYKLKLGDTVRTIPTIGFNVESVEYKNASFTIWDVGGQQKIRPLWRHYFQNTIGLIFVVDSSDRHRIIEARNELHNILTDHELRNAILLVFANKQDLSTAMSVAEIADKLGLHSLEDRSWYIQSTSAISGQGLYQGLDWLLDNISTRKHEK 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03747 304 CDD Arf1_5_like 139 296 IPR045872 GO:0003924
Aip09g03747 304 SMART arf_sub_2 121 301 - -
Aip09g03747 304 Pfam ADP-ribosylation factor family 127 297 IPR006689 GO:0003924|GO:0005525
Aip09g03747 304 PRINTS GTP-binding SAR1 protein signature 194 219 IPR006689 GO:0003924|GO:0005525
Aip09g03747 304 PRINTS GTP-binding SAR1 protein signature 139 162 IPR006689 GO:0003924|GO:0005525
Aip09g03747 304 PRINTS GTP-binding SAR1 protein signature 239 260 IPR006689 GO:0003924|GO:0005525
Aip09g03747 304 PRINTS GTP-binding SAR1 protein signature 167 191 IPR006689 GO:0003924|GO:0005525
Aip09g03747 304 SMART sar_sub_1 121 297 IPR006689 GO:0003924|GO:0005525
Aip09g03747 304 TIGRFAM small_GTP: small GTP-binding protein domain 137 262 IPR005225 GO:0005525
Aip09g03747 304 Gene3D - 125 304 IPR027417 -
Aip09g03747 304 SUPERFAMILY Chlorophyll a-b binding protein 77 116 - -
Aip09g03747 304 ProSiteProfiles small GTPase Arf family profile. 131 297 - -
Aip09g03747 304 PANTHER ADP-RIBOSYLATION FACTOR 2-LIKE ISOFORM X1 122 300 - -
Aip09g03747 304 PANTHER ADP RIBOSYLATION FACTOR-RELATED 122 300 IPR024156 GO:0005525
Aip09g03747 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03747 Aip-Chr9 144306853 144310023 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03747 K07937 - jre:108996172 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03747 09 144306853 144310023 Aip09g03747 09 144306853 144310023 ECH