Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03746 ATGCAAAGCATCATTTATCTTTGCGTAACAATCATCTTGTGCATTCACACAAACAATAAGTGTGGTTTCCTCGTACAAGGTCTCACCTCATCCTCAGACATTGAAGCACTAAAGGCTTTCAAGGCCTCAATCAAATCCTCCTCAATAACACCATGGTCATGCATAGCATCCTGGAACTTCACCACTGACCCATGCTCCGTCCCTCGCCGCACCCACTTCACGTGCGGCCTCACCTGCACCGCCGACAACACCCGCATCAACCAAATCACCCTCGACCCCGCTGGCTACACAGGAACACTCACCCCACTCGTCTCTCAACTCACCACACTCATCACTCTCGACCTCTCCGATAACTCTTTCTATGGCACAATCCCTTCTTCTCTATCTTCCCTCTCAAAACTCCAAACTTTATCCCTCCGATCCAACTCTTTCTCAGGTTCAATCCCTCCCTCCATAGCCACCCTCAAATCGCTCCAATCGCTTGATCTTTCACAGAATTCTCTTTCTGGGTTCCTTCCAAAGTCCATGAACTCTCTCACTAGTCTCCGAAGATTGGACCTCAGCTTCAACAAGCTCACCGGTGGACTCCCCAAGTTACCACCCAACTTGCTGGATTTGGCGATCAAGGCAAATTCTCTATCTGGGGTTCTTCAAAAAACAACCTTTGAAGGTTTGAACCAGTTGGAAGTGGTGGAACTCAGTGATAACGCACTTCAGGGGATCATCGAAACGTGGCTCTTCCTTTTGCCTTCCCTGCAGCAACTGGATTTGGCCAACAACTCCTTCAGTGGTGTTGAGATCTCGAGGCCGGTTGTTGGCGGTGGCGGGAACAGCCTCGTGGCGGTGAATCTTGGATTCAACAAGATCCAAGGCTACGCCCCCGCGAATCTCGGCGCGTATCCGTCGCTGTCATTTTTGTCGCTCCGTTACAACGCGCTACGTGGCGCGATACCATTGGAATACGGGAAAAGCAAGTCCATGAAGAGGTTGTTCCTGGACGGGAACTTCCTAATGGGGAGGCCACCGGCGGGACTGGTGGCTGCCGGAGCTGAAGTTTCCGGCAGCTTGGGTGACAACTGCCTTGAGGGGTGTCCGGCGATGTCGCAGCTGTGCACGCCGAAACAGAAACCGAGCTCTGTTTGCAAGCAAGTCTACCGTGGAAGACCTACGAGATAG 1176 0.5196 MQSIIYLCVTIILCIHTNNKCGFLVQGLTSSSDIEALKAFKASIKSSSITPWSCIASWNFTTDPCSVPRRTHFTCGLTCTADNTRINQITLDPAGYTGTLTPLVSQLTTLITLDLSDNSFYGTIPSSLSSLSKLQTLSLRSNSFSGSIPPSIATLKSLQSLDLSQNSLSGFLPKSMNSLTSLRRLDLSFNKLTGGLPKLPPNLLDLAIKANSLSGVLQKTTFEGLNQLEVVELSDNALQGIIETWLFLLPSLQQLDLANNSFSGVEISRPVVGGGGNSLVAVNLGFNKIQGYAPANLGAYPSLSFLSLRYNALRGAIPLEYGKSKSMKRLFLDGNFLMGRPPAGLVAAGAEVSGSLGDNCLEGCPAMSQLCTPKQKPSSVCKQVYRGRPTR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03746 391 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 25 389 - -
Aip09g03746 391 Gene3D Ribonuclease Inhibitor 199 366 IPR032675 -
Aip09g03746 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 25 389 - -
Aip09g03746 391 Gene3D Ribonuclease Inhibitor 30 198 IPR032675 -
Aip09g03746 391 PRINTS Leucine-rich repeat signature 158 171 - -
Aip09g03746 391 PRINTS Leucine-rich repeat signature 179 192 - -
Aip09g03746 391 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Aip09g03746 391 SMART LRR_typ_2 155 178 IPR003591 -
Aip09g03746 391 SMART LRR_typ_2 225 248 IPR003591 -
Aip09g03746 391 SMART LRR_typ_2 249 270 IPR003591 -
Aip09g03746 391 SMART LRR_typ_2 179 206 IPR003591 -
Aip09g03746 391 SMART LRR_typ_2 107 131 IPR003591 -
Aip09g03746 391 SUPERFAMILY L domain-like 75 342 - -
Aip09g03746 391 Pfam Leucine rich repeat 201 261 IPR001611 GO:0005515
Aip09g03746 391 Pfam Leucine rich repeat 149 192 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03746 Aip-Chr9 144293707 144295407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03746 104 363 Receptor kinase-like Gene Family AT5G20480 33.333 2.61e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03746 - - gmx:100801713 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03746 09 144293707 144295407 Aip09g03746 09 144293707 144295407 ECH