Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03622 ATGCCGTCGCAGCTTCATTCTCCCAATCCCTCGAGGCCGCGCTACTTCATTCACTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTACGATGGAATACTCGCCGCCATCGTCGTCCCCGACGGCGAAACAGCCCCCGTTGGAGCTCCCATCGCCTTACTCGCCGAGACGGAGGAAGAAGTCGCCGAAGCCAAAGCCAAAGCTGCCAAGTCATCACAATCCCAATCCTCTGCGCCTCCTCCTCAGCCTGCAAATCCAGCTCCGGCAATTTCTCAGCCTTCTCCTCCTCCTCCTCCTCCGCCATCGGCGGCAGCTTCTGACGGACCGAAGAAGACCGTCGCCACGCCTCAGGCGAAGAAGCTCGCAAAGCAGCACAAGGTAGACCTTGCGTCTCTCGCCGGGACCGGTCCGTTTGGTCGGATCACTCCGGCCGACGTGGAGACCGCTGCTGGGATTGCGCCATCAAAGAGCAGTCCTGCTCCGGCGGCTCCTGCTCCGGCGAGCTCAGCTCCTCCAAAAGCAGCTGCTGCTGGTGCAGTGGCGCCGCCTCCAATTCCAGGCTCTAGCGTTGTTACATTCACGACAATGCAATCTGCAGTTGCAAAGAACATGGTGGAGAGCCTCTCCGTGCCTACATTCCGTGTTGGTTATCCTGTGATCACTGATGCACTTGATGCTTTATATGAGAAGGTGAAGCCGAAGGGGGTGACAATGACAGCAATTTTGGCCAAGGCTGCTGCAATGGCACTTGTCCAACATCCAGTGGTCAATGCCAGCTGCAAAGATGGCAAGAACTTTGCCTATAACAGCAACATCAACATTGCAGTTGCTGTGGCAATCAACGGCGGTTTGATTACCCCTGTACTTCAGGATGCTGACAAGTTGGACTTGTATCTGCTGTCCCAAAAGTGGAAAGAGCTAGTTAATAAAGCTCGTGGAAAGCAATTGCAACCCAATGAGTATAATTCAGGAACTTTCACACTCTCCAATCTGGGCATGTTTGGAGTTGACAGGTTTGATGCCATACTTCCTCCAGGGCAGGGGGCTATCATGGCAGTTGGAGCATCAAAGCCTACTGTCGAGGCTGATGCAACTGGATTCTTCAAGGTGAAAAATAAGATGCTGGTGAATGTAACAGCTGATCACCGAATAATTTATGGCGCTGATTTGGCCGCCTTCCTTCAGACATTCTCCAAAATCATTGAAAACCCAGACAGTCTAACATTTGAAGGATTCTGTAAACAGCAAGTCAGCAATGTTTTCTGTGCCGCATGA 1353 0.4871 MPSQLHSPNPSRPRYFIHWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFYDGILAAIVVPDGETAPVGAPIALLAETEEEVAEAKAKAAKSSQSQSSAPPPQPANPAPAISQPSPPPPPPPSAAASDGPKKTVATPQAKKLAKQHKVDLASLAGTGPFGRITPADVETAAGIAPSKSSPAPAAPAPASSAPPKAAAAGAVAPPPIPGSSVVTFTTMQSAVAKNMVESLSVPTFRVGYPVITDALDALYEKVKPKGVTMTAILAKAAAMALVQHPVVNASCKDGKNFAYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVNKARGKQLQPNEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVEADATGFFKVKNKMLVNVTADHRIIYGADLAAFLQTFSKIIENPDSLTFEGFCKQQVSNVFCAA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03622 450 Gene3D - 212 434 IPR023213 -
Aip09g03622 450 Gene3D - 137 176 IPR036625 GO:0016746
Aip09g03622 450 Coils Coil 80 100 - -
Aip09g03622 450 MobiDBLite consensus disorder prediction 90 152 - -
Aip09g03622 450 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 54 434 - -
Aip09g03622 450 Pfam e3 binding domain 139 173 IPR004167 GO:0016746
Aip09g03622 450 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 139 176 IPR004167 GO:0016746
Aip09g03622 450 SUPERFAMILY CoA-dependent acyltransferases 215 434 - -
Aip09g03622 450 SUPERFAMILY Single hybrid motif 55 99 IPR011053 -
Aip09g03622 450 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 215 433 IPR001078 GO:0016746
Aip09g03622 450 Gene3D - 52 105 - -
Aip09g03622 450 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 54 434 IPR045257 GO:0006086|GO:0045254
Aip09g03622 450 MobiDBLite consensus disorder prediction 175 207 - -
Aip09g03622 450 MobiDBLite consensus disorder prediction 105 131 - -
Aip09g03622 450 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 132 175 IPR036625 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03622 Aip-Chr9 142938559 142941960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03622 55 435 Acyl Lipid Metabolism Gene Families AT3G25860 76.903 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03622 K00627 - gmx:100813087 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03622 09 142938559 142941960 Aip09g03622 09 142938559 142941960 ECH