Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03519 ATGGCGGCGACTGCCACGTGGCAGCCACAGGAGCAAGGGTTCAAGGAGATCTGCGGCCTCCTCGAGCAGCAGATTTCGCATTCTTCTTCCGCTGACAAGGCTCAGATTTGGCAGCACCTTCAGCACTACTCTCAGTTCCCCGACTTCAACAATTACCTCGCCTTCATCTTCTCTCGTGCTGAGGGAACATCAGTGGAGGTTAGGCAAGCTGCGGGTCTTTATCTGAAGAATAACCTCAGAAGCACATATAAATCGTTGCTACCTGCATACCAACAGTATGTGAAATCCGAGTTGCTGCCGTGTCTTGGAGCAGCAGATAGGCACATAAGGTCCACTGCTGGAACTATTATTAGTGTTGTCGTTCAATTAGGTGGAGTTTCAGGCTGGCCTGAATTGTTGCAAGCCCTTGTAACTTGCTTGGACAGTAATGATTTGAGTCACATGGAAGGTGCAATGGATGCATTATCCAAGATCTGTGAGGATATTCCCCAAGTACTTGATGCTGAAGTACCTGGGTTAGCAGAGCGCCCTATTAACATATTTCTCCCCAGATTATTTCGGTTTTTCCAGTCACCTCATGCTTCATTAAGAAAGCTGTCATTGGGTTCTGTAAATCAATACATTATGTTAATGCCTACTGCCTTGTACGTATCCATGGACCAATATCTCCAAGGTTTATTTATCCTTTCAAATGACCCTAATTCTGAAGTGCGGAAATTGGTTTGTGCAGCGTTTGTCCAGCTAATTGAAGTTCGTCCATCTTTCTTAGAGCCACATTTAAGGAATGTGATTGAGTACATGTTGCAAGTCAACAAGGACACAGATGATGAAGTCGCCCTTGAAGCCTGTGAATTCTGGTCTGCATATTGTGACGCTCAACTGCCACCTGAAAATTTACGAGAATTCTTGCCTCGTTTAATTCCGATTTTGTTGTCAAACATGGCTTATGCAGATGACGACGAATCTCTTGTTGAAGCTGAGGAAGAAGGATCTCAACCAGATCGAGACCAGGATCTTAAACCGCGATTTCATGTATCAAGGTTTCATGGATCAGATGAAATCGATGATGATGATGATGACGTTGTCAATACATGGAATCTACGGAAATGCAGTGCTGCCGCTCTAGATATTCTCTCAAATGTGTTTGGAGATGAGATCCTTCCAACTTTGATGCCTATTGTTCAGGCCAAGTTGTCAACTGGTGGTGATGATGCTTGGAAAGAAAGGGAAGCTGCTGTCTTGGCTCTTGGGGCGATAGGAGAGGGTTGCATCAATGGTCTTTATCCTCATTTGGCTGAGATTGTGGCATTTCTAATCCCCCTTCTTGATGATAAGTTTCCTTTGATACGAAGTATTTCATGCTGGACACTCTCTCGGTTTAGCAAATTTATTGTTCAGGGTATTGGACACCCAAAAGGCTATGACCAATTTGATAGTGTTCTTATGGGTCTTCTTCGAAGAATTTTGGATGATAATAAGCGGGTGCAAGAGGCTGCTTGTTCAGCTTTTGCAACACTTGAAGAGGAGGCTGCAGAAGAGTTGGCACCACGATTAGAAATTATATTGAAGCACCTGATGCTAGCGTTTGGGAAATATCAGAGACGAAATCTCAGAATTGTATATGATGCCATTGGAACTCTAGCTGAAGCTGTTGGTGGGGAGCTGAATCAGCCTGTTTATCTTGACATTCTCATGCCACCATTAATAGAGAAATGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCTCTCTTGGAATGCTTTACATCTATAGCACATGCATTGGGCACAGGATTCTCTCAATTTGCTGAACCAGTATTTAAGAGGTGCATAAATATAATCCAGACCCAACAATTTGCAAAGGCTGATCCTGTTGCAGCTGGTGTTCAGTATGACAAGGAGTTCATTGTATGCTCTCTTGATCTGCTATCAGGACTAGCAGAGGGTCTTGGCAGTGGAATAGAGAGTCTGGTTTCACAATGTTCCTTGAGGGACCTACTTCTGCATTGCTGTGTGGATGACGCTCCTGATGTTCGACAAAGTGCCTTTGCATTGCTTGGAGACCTTGCTCGAGTATGCCCAATTCATTTGCACCCTCGTTTGTCTGAGTTTCTTGAGGCTGCAGCCAAGCAGCTGGAAATTTCTAAGGTTAAAGAGGCTATTTCAGTAGCAAATAATGCATGCTGGGCTATTGGAGAACTTGCAGTTAAGGTTCGTCAGGAAGTTTCTCCCATTGTTTTAACTGTAATTTCATGCCTTGTCCCAATTCTTCAGCATGCAGAGGGACTCAACAAGTCACTCATAGAAAACAGCGCAATAACACTAGGGAGGCTTGCATGGGTCTGTCCAGAACTTGTATCTCCACATATGGAGCATTTCATGCAACCTTGGTGCACTGCTCTGTCAATGATACGGGATGATGTTGAGAAAGAAGACGCTTTTAGAGGTCTATGTGCTATGGTCAAAGCTAATCCTTCTGGAGCTCTAAGTTCACTTGTGAATATGTGTACAGCCATAGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGCCAGGTTTTGCATGGATATAAACAGATGCTGCGTAACGGAGCATGGGACCAGTGTATGTCTGCTTTGGAGCCCCCGATAAAAGAAAAGCTTTCGAAATATCAAGTATAA 2676 0.4383 MAATATWQPQEQGFKEICGLLEQQISHSSSADKAQIWQHLQHYSQFPDFNNYLAFIFSRAEGTSVEVRQAAGLYLKNNLRSTYKSLLPAYQQYVKSELLPCLGAADRHIRSTAGTIISVVVQLGGVSGWPELLQALVTCLDSNDLSHMEGAMDALSKICEDIPQVLDAEVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPTALYVSMDQYLQGLFILSNDPNSEVRKLVCAAFVQLIEVRPSFLEPHLRNVIEYMLQVNKDTDDEVALEACEFWSAYCDAQLPPENLREFLPRLIPILLSNMAYADDDESLVEAEEEGSQPDRDQDLKPRFHVSRFHGSDEIDDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVQAKLSTGGDDAWKEREAAVLALGAIGEGCINGLYPHLAEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGIGHPKGYDQFDSVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMLAFGKYQRRNLRIVYDAIGTLAEAVGGELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFSQFAEPVFKRCINIIQTQQFAKADPVAAGVQYDKEFIVCSLDLLSGLAEGLGSGIESLVSQCSLRDLLLHCCVDDAPDVRQSAFALLGDLARVCPIHLHPRLSEFLEAAAKQLEISKVKEAISVANNACWAIGELAVKVRQEVSPIVLTVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVNMCTAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPIKEKLSKYQV 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03519 891 Pfam HEAT-like repeat 406 459 - -
Aip09g03519 891 SUPERFAMILY ARM repeat 7 881 IPR016024 -
Aip09g03519 891 SMART IBN_N_2 36 104 IPR001494 GO:0006886|GO:0031267
Aip09g03519 891 Gene3D - 4 891 IPR011989 -
Aip09g03519 891 ProSiteProfiles Importin-beta N-terminal domain profile. 36 104 IPR001494 GO:0006886|GO:0031267
Aip09g03519 891 Pfam HEAT repeat 666 694 IPR000357 GO:0005515
Aip09g03519 891 PANTHER IMPORTIN BETA 7 889 IPR040122 GO:0006606
Aip09g03519 891 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Aip09g03519 891 PANTHER TRANSPORTIN 1 ISOFORM 1 7 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03519 Aip-Chr9 141882148 141893477 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03519 K18752 - gmx:100792702 1655.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03519 09 141882148 141893477 Aip09g03519 09 141882148 141893477 ECH