Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03511 ATGGCTTTATGGGCCATGGGGCATTTCACTTTCACATTTGGGGCAATTTATTTATGTGGTCATTCCTTCATCATCTTCTTCACTTGTAAGCTCTCACTTTTCATTCTCTCTCTGCTGCTTACTGCTTCGCGTGTGCTTCTCTTCTCTGACACCAAGTGGGCACGAACGATGAACAAGAGGCCCAGAACCACCATCGACAAGCCTCTCCTCGATCTCTGCCATCGAGAGCTTGGTCAGATTTCCAACCGCAATTTCGCTCACCGTCTTGCCGCTTCCGAGGACCTTGTGCTTCGGCTTGATGTGTTGAGGAAGCTGGAAAAGCATAGAGGGTGTGTCAACACAGTTTGCTTCAATGCAGATGGTGACATCTTGGTGTCTGGTTCTGATGACCGCAGGGTCATTCTTTGGGACTGGGAATCTGGCCATATTAAGCTCTCTTTTCATTCTGGTCACACTAACAATGTTTTCCAGGCTAGGATCATGCCCCATTCCGATGATCGAAGCATTGTCACCTGCGCTGCTGATGGACAGGTGAGACATGCTCAAATTCTTGAACGTGGCAGAGTGGAAAATAAGTTGCTGGCCAAGCATCAAGGACGGGCTCATAAGATGGCTATTGAGCCTGGTAGCCCTCATATATTTTACACCTGTGGTGAAGATGGATTAGTACAGCATTTTGATCTGAGAACTGGCACCGCAACAGAACTCTTTACGTGCCAGCCAATTAAGGACAGATGGGATTACATTCCAGTCATCCATCTTAATGCAATTGCAATTGATCCAAGGAATCCAAATCTGTTTGCAGTTGCTGGGTCTGACGAGTATACTCGACTTTATGATATTCGCAAATATAAGTGGGATGGATCCTCCGATTTTGGCCAGCCAGTAAATTTCTTCTGCCCTCCACACTTGATTGGTGATCAACGAGGAGTTGGAATAACAGGCTTGGCATTTTCTGAACAGAGAGAGCTACTAGTATCATACAATGATGAGTATATTTATCTTTTTACACAAGATATGGGCCTGGGGCCTAACCCTGATCTCGGTTCCCCTGTATCTATGAACAGTGATTCAAGTGAAATGGGAGGTAGTCTTGGCTCTGCAGCCTCACTGTCAAACATTTCTGGCTCTGCTGATGAGAAAATCACTCCGCAAGTTTTTAAGGGACACAGGAATTCTGAGACAGTGAAGGGTGTTAACTTTTTTGGGCCTAAGTGTGAGTATGTGGTAAGCGGGTCAGATTGTGGTCGGATTTTCATTTGGAGAAAGAAAGATGGGCAGCTTATTCGTGTCATGGAAGCGGATAAGAATGTTGTGAACTGCATTGAGTCTCATCCTCATACAATGGTTCTTGCAAGCAGCGGAATTGAGTATGACATCAAGATGTGGACTCCAAAGGCACACGAGAAAGCTACTTTGCCCAAAAACATTGAGCAGAAACCCAAGGCTAGGGGCTGGATGTACCGGATAGCTTCTCCTGAAGAACTGATGTTGCAACTGTTTTCACTTCCAAGAAGGAGGGTTAGGACAAACAACAATGGAGAAAATTCCGCTGCGGATCGAGAACTTCTGGAGTTGATCTTGACATTCAACGCTAATAGCGACAGTTCTAATGATGACGACGACGACGATGGCGGAGACACAGTGAGTCAAGAGGACTTGTTCAGTTGA 1671 0.4584 MALWAMGHFTFTFGAIYLCGHSFIIFFTCKLSLFILSLLLTASRVLLFSDTKWARTMNKRPRTTIDKPLLDLCHRELGQISNRNFAHRLAASEDLVLRLDVLRKLEKHRGCVNTVCFNADGDILVSGSDDRRVILWDWESGHIKLSFHSGHTNNVFQARIMPHSDDRSIVTCAADGQVRHAQILERGRVENKLLAKHQGRAHKMAIEPGSPHIFYTCGEDGLVQHFDLRTGTATELFTCQPIKDRWDYIPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSSDFGQPVNFFCPPHLIGDQRGVGITGLAFSEQRELLVSYNDEYIYLFTQDMGLGPNPDLGSPVSMNSDSSEMGGSLGSAASLSNISGSADEKITPQVFKGHRNSETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGQLIRVMEADKNVVNCIESHPHTMVLASSGIEYDIKMWTPKAHEKATLPKNIEQKPKARGWMYRIASPEELMLQLFSLPRRRVRTNNNGENSAADRELLELILTFNANSDSSNDDDDDDGGDTVSQEDLFS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03511 556 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 50 539 - -
Aip09g03511 556 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 50 539 IPR045151 -
Aip09g03511 556 SMART WD40_4 187 227 IPR001680 GO:0005515
Aip09g03511 556 SMART WD40_4 232 280 IPR001680 GO:0005515
Aip09g03511 556 SMART WD40_4 425 464 IPR001680 GO:0005515
Aip09g03511 556 SMART WD40_4 297 337 IPR001680 GO:0005515
Aip09g03511 556 SMART WD40_4 98 137 IPR001680 GO:0005515
Aip09g03511 556 SMART WD40_4 140 182 IPR001680 GO:0005515
Aip09g03511 556 SMART WD40_4 380 422 IPR001680 GO:0005515
Aip09g03511 556 MobiDBLite consensus disorder prediction 533 556 - -
Aip09g03511 556 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 105 137 - -
Aip09g03511 556 Pfam WD domain, G-beta repeat 385 421 IPR001680 GO:0005515
Aip09g03511 556 Pfam WD domain, G-beta repeat 102 137 IPR001680 GO:0005515
Aip09g03511 556 ProSiteProfiles Trp-Asp (WD) repeats profile. 105 146 IPR001680 GO:0005515
Aip09g03511 556 SUPERFAMILY WD40 repeat-like 97 463 IPR036322 GO:0005515
Aip09g03511 556 Gene3D - 92 466 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03511 Aip-Chr9 141823823 141827609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03511 K11804 - gmx:100791300 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03511 09 141823823 141827609 Aip09g03511 09 141823823 141827609 ECH