Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03510 ATGGGGAGTGTGAGTGTTCAACTCCAGTGGAGATGGAACCAACCACCACCGTCTCCGTCACTGTCACTACCAGTTACCGTTACCATGACAGTGATGATGCAGAGGTGTAGGTGTACGCTAACCAAACAAGGCGAACGCTTCCTCACAAAGCTGGCAGCAAATTCCGATTCCGGAACCCACACATTCATTCGACGATTCGTTAATGGTTCTCCCAAATCGGTTGCTCTATCCACTCTCTCTCATCTTCTATCTCCTTCCTCCTCCTTCCCCCACCTCTCTTCTCTCGCCCTCCCTCTTTATTCATGTATCGCCCAAGCTTCCTGGTTCACTTGGAACCCTGCCATTGTTGCGGACCTTGCAGCGCTTCTTGATCAACTGGGTCGTTCTGAGGAAGCTGAAGCTCTGGTCTTTGAGGCCACTTCCAAGCTCGAATCACGAAACAGAGAGCTTGCTCTTTTCTACTGTAAGTTGCTTGAGTCACACTCCAAGCGAGGCTCACAGAAAGGTTTTGATGTTGCTTATTGTTACCTGAACCAGCTTCTTCGTAGTTCTTCCTCTGTTTACATAAAACGCAGGGCTTTTGAGTATATGATTAGTGGTTTGTGTGCAATGGATAGGCCTCGTGAAGCCGAGGATTTGGTTGAGGATTTGAGAGGCAATGGTGGAGGGATTGACCCTTCAGCTTTTGAGTTGAAGTCCATTATGTATGGTTATGGGAGGTTGGGGTTGTTCCATGATTTGCATAGAGTTGTGGATCAAATGAAGAGAAGTGGCTTTGAGATTGACACTGTTTGCGCCAATATGGTTCTTTCAACTTATGGTACTCATGGTGAGCACATGGAAATGGTTTCCTGGCTTAAGAAGATGAGAAGCTCAGGCATCTCATTCTCAGTCAGAACCTACAATTCTGTATCAAACTCTTGCCCAATGATCACGAGAATGATGGCGGAGCTGAATGAGTTGCCGCTGTCAATTGAGGAGTTGAATGTTAGATTGGAAGGAGGGGAGGCTATGGTAGTTAAGGAGTTACTGGATTCTTGTGTGATTTTGGAGGAGGTAATGGTGTGGGATTCATCAGAGGCTAAATTGGATTTGCATGGATGTCATTTGGGTTCATCCTATTTGATCATGCTGCTTTGGTTGAAAGAGATGCAACGGAGATTGAATGACTCGAATTATGGGATTCCAGCAGAAATCACTGTGGTTTGTGGGTTAGGAAAGCATAGCAATGTCAGAGGAGAGTCTCCTGTAAAAGTGTTGGTTAAGAAGATGATGGTGAATATGGGAAGTCCCTTGAGGATTGATAGGAAGAATAATGGTTGCCTTGTAGCCAAAGGTAGAGCCGTGAAAAACTGGTTATGTTAA 1365 0.4564 MGSVSVQLQWRWNQPPPSPSLSLPVTVTMTVMMQRCRCTLTKQGERFLTKLAANSDSGTHTFIRRFVNGSPKSVALSTLSHLLSPSSSFPHLSSLALPLYSCIAQASWFTWNPAIVADLAALLDQLGRSEEAEALVFEATSKLESRNRELALFYCKLLESHSKRGSQKGFDVAYCYLNQLLRSSSSVYIKRRAFEYMISGLCAMDRPREAEDLVEDLRGNGGGIDPSAFELKSIMYGYGRLGLFHDLHRVVDQMKRSGFEIDTVCANMVLSTYGTHGEHMEMVSWLKKMRSSGISFSVRTYNSVSNSCPMITRMMAELNELPLSIEELNVRLEGGEAMVVKELLDSCVILEEVMVWDSSEAKLDLHGCHLGSSYLIMLLWLKEMQRRLNDSNYGIPAEITVVCGLGKHSNVRGESPVKVLVKKMMVNMGSPLRIDRKNNGCLVAKGRAVKNWLC 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03510 454 PANTHER OS02G0120000 PROTEIN 25 454 - -
Aip09g03510 454 PANTHER ATPASE EXPRESSION PROTEIN 3 25 454 - -
Aip09g03510 454 ProSiteProfiles Smr domain profile. 363 447 IPR002625 -
Aip09g03510 454 TIGRFAM PPR: pentatricopeptide repeat domain 265 296 IPR002885 -
Aip09g03510 454 TIGRFAM PPR: pentatricopeptide repeat domain 233 263 IPR002885 -
Aip09g03510 454 Pfam PPR repeat 266 294 IPR002885 -
Aip09g03510 454 Pfam PPR repeat 233 259 IPR002885 -
Aip09g03510 454 Pfam PPR repeat 197 221 IPR002885 -
Aip09g03510 454 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 227 261 IPR002885 -
Aip09g03510 454 Gene3D - 347 445 IPR036063 -
Aip09g03510 454 SUPERFAMILY SMR domain-like 360 445 IPR036063 -
Aip09g03510 454 SMART SMR_2 360 447 IPR002625 -
Aip09g03510 454 Gene3D Tetratricopeptide repeat domain 121 320 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03510 Aip-Chr9 141821811 141823710 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03510 - - gmx:100805233 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03510 09 141821811 141823710 Aip09g03510 09 141821811 141823710 ECH