Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03332 ATGGCCTCTTCGTCTTCTTTTTGTTATCATTCTTCATATAATGCGGTCGCTGCGGTGGCTATCACGCTTCTTTTGTTCGTGTTCGGAGACGCCGCCGACGATGCTCCAAAACTTGATCCATCCTGCGCTAAAGATGTTCAATTGGTGAAGATGAAGCAATGGGTTGATGGCAATGTTGTGAATTCCGGGTACGGTGGCATGAGTGCAATGTTTGGTGCTCAGTTTCCCAAGGAAGTCGGTCAGAGTCCCAAATCTCCTCTTGTTTTTGCCAATCCTAGAGACTGTTGTGTCCCACCAATTACTAAGTTACTTGTTGGATCAGTAACTTTATGTCAGCGTGGTACTTGCGACTTCACAACTAAAGCTGCAATTGCACAGGCAGCAGGTGCAGTTGCCGTATTGGTCATAAATGAGTCGGACGACCTTTTCTCAATGGAGTGTTCCAATAGCTCTAGAGTAGACATTTCAATCCCAGTTGCAATGATATCAAAGACAGCAGGAGATGATCTCGACAATGAGTTGACATCTGGAAAGAAAGTGGAACTTTCGATATATGCTCCAACTCGCCCACTTTTAGACTATTCAGTTGCAGTTTTGTGGTTGATGGCTGTCGGAACAGTTATATGCGCTTCAACATGGGCAGATATAACAGCTGCTGATTGTGATGAACGCTACAATGAATTGTCTCCCAAGGGATCTTTCAAATCCGAAACAATGAAAGATGAGGAGGACATTGTTAACATAGACACAAAGGGTGCTATTATCTTTGTCATTTCGGCATCCACTTTTCTTGTGCTACTATTTTTCTTCATGTCATCTTGGTTTATCTGGGTGCTGATTGTACTTTTCTGCATTGGTGGTGTTGAGGGGATGCACAATTGTATTGTGAGCCTCGTTTTAAGAGTATTTCCAAAACTTGGACGGAATATAGTGAAGGTACCTATGTTTGGGAAGAGTTCTATCTTCTCAATAGTAGTTTTTATAGTATGTGTGGCATTTGCGGTATTATGGATTGTTAATCGGCGGGAGTCATATTCATGGTTCGGCCAAGATGTCCTTGGCATTTGTTTGATGATAACAATCTTGCAGTTGGCACGATTACCTAATATTAAGGTTGCAACTGTACTTCTTTGTTGTGCATTTGTATACGACATCTTTTGGGTGTTCATATCTCCAGTGATATTCCATAAGAGTGTTATGATTACAGTTGCTCGAGGTGACAAGGCTGGTGGGGAAGCAATTCCTATGCTTTTGAGGTTTCCTCGTCCACACGATCCTTGGAAAGGTTATGACATGATTGGATTTGGAGACATTCTCTTCCCTGGCTTGCTTGTTTGCTTTGCTCGTAGATTTGACAAAGAGAACAACAAGAGGTCAGTGAATGGATATTTTCTTTGGTTGGTAATTGGCTATGGCGTCGGCCTTTTTCTAACATATCTTGGGCTATACTTGATGAAGGGTCATGGACAACCAGCACTTCTCTACCTTGTTCCATGTACCTTGGGTACGGCTGTCATATTGGGATGTATAAGAGGAGAAATGAGGAGTCTTTGGGATTACAAACCAAACTTGCCTCCCTCCAAAGTGCCTCCAGAAGTGTAA 1602 0.427 MASSSSFCYHSSYNAVAAVAITLLLFVFGDAADDAPKLDPSCAKDVQLVKMKQWVDGNVVNSGYGGMSAMFGAQFPKEVGQSPKSPLVFANPRDCCVPPITKLLVGSVTLCQRGTCDFTTKAAIAQAAGAVAVLVINESDDLFSMECSNSSRVDISIPVAMISKTAGDDLDNELTSGKKVELSIYAPTRPLLDYSVAVLWLMAVGTVICASTWADITAADCDERYNELSPKGSFKSETMKDEEDIVNIDTKGAIIFVISASTFLVLLFFFMSSWFIWVLIVLFCIGGVEGMHNCIVSLVLRVFPKLGRNIVKVPMFGKSSIFSIVVFIVCVAFAVLWIVNRRESYSWFGQDVLGICLMITILQLARLPNIKVATVLLCCAFVYDIFWVFISPVIFHKSVMITVARGDKAGGEAIPMLLRFPRPHDPWKGYDMIGFGDILFPGLLVCFARRFDKENNKRSVNGYFLWLVIGYGVGLFLTYLGLYLMKGHGQPALLYLVPCTLGTAVILGCIRGEMRSLWDYKPNLPPSKVPPEV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03332 533 SMART psh_8 244 511 IPR006639 GO:0004190|GO:0016021
Aip09g03332 533 PANTHER SIGNAL PEPTIDE PEPTIDASE 16 524 IPR007369 GO:0004190|GO:0016021
Aip09g03332 533 Pfam Signal peptide peptidase 241 521 IPR007369 GO:0004190|GO:0016021
Aip09g03332 533 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE PROTEIN 16 524 - -
Aip09g03332 533 SUPERFAMILY PA domain 104 168 IPR046450 -
Aip09g03332 533 Pfam PA domain 86 170 IPR003137 -
Aip09g03332 533 Gene3D - 53 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03332 Aip-Chr9 139723182 139730380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03332 107 224 Miscellaneous Gene Families AT4G20110 31.496 2.81e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03332 K09597 - gmx:100782203 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03332 09 139723182 139730380 Aip09g03332 09 139723182 139730380 ECH