Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03260 ATGGATACAAAGGGAAGATTAGTTGCAGGCTCACATAACAGGAATGAGTTTGTTCTTATCAATGCTGATGACACTGCAAGAGTGAATGGAGTTACAGAATTGAGTGGACAAATTTGCCAGATCTGTGGGGATGAGATTGAGGTTACTGTGGATGGGGAACCCTTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGTAGGCCTTGCTATGAGTATGAAAGAAGAGAGGGTAACCAAGCTTGCCCTCAGTGCAAAACCAGATACAAACGAAGCAAGGGTAGTCCTAGAGTTGAAGGTGATGAAGAAGAGGATGGTATTGATGATTTGGAGAATGAGTTTGACATTGGAAGCAATATCAAGCATGATCCTTGTCACATTGCTGAGGCAATGCTTGCGGCTCGCTTTAACGTTGCCCGGAATTCACAGTTGAATGCTTCTGGAATCACCACACCATCAGAGTTAGATGCAGCTTCTGTAGCTGCTGATATCCCTCTCCTGACTTATGGTCATGAGGATGTTGGGATTTCTGCTGAGAAGCATGCTCTCATTGTTCCTCCATTCATGCATCGTGGTAGACGGATTCATCCTATGCCTTTTCCTGATTCATCTATACCAGCTCAACCCAGACCGATGGATCCTAAAAAAGATTTGGCAGTTTATGGATATGGAAGTGTTGCATGGAAGGAACGGATGGAGGAGTGGAAGAAAAAACAGAATGAAAAAATTGAGGTGGTTCAGCACGAAATGGTTGATGATGATGGTGGGAAAAATGGTGATGAGTTTGATCATCCAGATTTGCCTAAAATGGATGAAGGTAGACAGCCACTCTGGAGGAAGTTGCCAATTAGTCCAAGCAAGATAAATCCATATCGAATTATCATAATACTCCGAATCGCCGTTCTTGGCCTATTTTTCCATTATAGAATTCTCCATCCTGTTAATGATGCATATGCATTATGGATGACATCAGTAATATGTGAAATCTGGTTTGCTGTGTCATGGATTTTGGATCAGTTTCCAAAATGGTGCCCAATCGAGCGCGAAACATACCTCGACCGTTTATCACTTAGATATGAGAAAGAAGGAAAGCCATCCGAATTAGCTGATATAGATGTATTTGTCAGTACAGTGGATCCAATGAAAGAGCCTCCACTTATCACTGCAAACACTGTTCTGTCCATTCTTGCCGTGGATTATCCGGTCGATAAAGTTGCATGCTATGTCTCAGATGATGGTGCAGCTATGCTTACATTTGAAGCGCTTTCAGAGACATCTGAATTCGCAAGGAAGTGGGTTCCATTCTGCAAGAAGTATAGCATTGAACCGCGGGCTCCTGAATGGTATTTTGCTCAGAAGGTTGACTATCTAAAAGACAAAGTGGATGCAACCTTTGTCAAGGAGCGTCGCGCTATTAAGAGGGAGTATGAAGAATTCAAAGTGCGGATTAATGCATTGGTTGCAATGGCACAGAAGGTGCCGGAGGATGGCTGGACAATGCAAGATGGAACTCCATGGCCCGGAAACAATGTCAGAGATCATCCTGGGATGATACAGGTTTTCCTAGGCCAAAACGGTGTTCGTGATATCGAAGGAAACGAGTTACCTCAACTAGTTTACGTGTCTCGCGAGAAAAGACCTGGATTTGAACACCACAAAAAAGCTGGTGCTATGAATGCCTTGATACGAGTTTCAGCTGTCATATCAAATGCTCCCTACCTACTGAATGTTGATTGTGATCACTACATAAACAATAGTAAGGCACTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAAAAGATATGCTATGTACAATTTCCTCAAAGATTTGATGGGATCGATCGTCATGATAGATACTCAAATCGCAATGTTGTGTTCTTTGATATTAACATGAAAGGTTTAGATGGCATCCAAGGACCAATTTATGTTGGAACTGGATGTGTCTTCCGGCGGCAGGCGCTTTATGGATACGATGCCCCTGTTAAGAAGAAACCGCCGACGAAGACTTGTAACTGTTGGCCTAGATGGTGCTGCTTGTGCTGTGGATCTAGGAAGAAGAATAGGAAAGTGAAATCAAGTGCTAAAAAGAAGATAAAGAGTAAGGATGGTACAAAGCAAATACATGCACTAGAAAACATTGAAGAGGGAATTGAAGGTATAGATAGTGAAAAGTCATCACTGATGTCGCAACTAAAATTTGAGAAAAAGTTTGGTCAATCACCTGTTTTCATAACTTCAACACTTATGGAAGATGGAGGTGTTCTAAAAGGAGCAAGTTCTACATCACTCTTGAAAGAAGCCATCCATGTGATTAGTTGTGGTTATGAAGATAAGACTGAGTGGGGAAAAGAGGTTGGATGGATATATGGTTCTGTTACAGAGGATATTCTAACAGGTTTCAAGATGCATTGTCATGGTTGGAGATCTGTGTACTGCATGCCGAAAAGGCCTGCTTTTAAGGGCTCGGCTCCTATAAATCTCTCAGACCGTCTGCACCAGGTTCTCCGTTGGGCTCTTGGTTCTGTTGAGATCATGTTGAGTAGGCACTGTCCTATATGGTATGGATATGGTTGCGGCTTGAAATGGCTGGAGCGCTTTTCTTACATTAACTCTGTCGTCTACCCTTTGACTTCGATTCCCTTAATTGCCTATTGCACCTTGCCAGCAGTCTGTCTCCTCACTGGGAAGTTCATAGTCCCTGAGATTAGCAACTATGCTAGTATCATTTTCATGTCCCTCTTCATCTCTATAGCTGCAACCGGCATCCTTGAAATGCAATGGGGAGGTGTTGGAATACATGATTGGTGGAGGAATGAACAATTTTGGGTCATTGGTGGTGCATCCTCGCACCTCTTCGCTCTCTTTCAAGGTTTGCTAAAGGTTCTGGCTGGAGTTAACACAAACTTCACAGTCACATCCAAAGCTGCGGACGACGGAGAATTCGCCGAACTTTACATCTTCAAGTGGACATCATTGTTGATCCCTCCTTTGACCTTGCTCATCATAAACATAATAGGAGTCATTGTAGGTGTCTCAGATGCAATAAACAATGGATATGATTCATGGGGTCCCCTTTTTGGTAAGCTATTTTTTGCTCTATGGGTCATTCTCCATCTCTATCCATTCCTCAAGGGAGTTATGGGAAAGCATGAAGGTGTTCCTACCATCATTCTGGTATGGGCTATTCTTCTTGCTTCAATCTTCTCACTACTTTGGGTAAGGATCAACCCATTTTTGTCAAAAAGTGACATTGTATTGGAACTTTGTGGGTTGAATTGTGATGATTAA 3297 0.4274 MDTKGRLVAGSHNRNEFVLINADDTARVNGVTELSGQICQICGDEIEVTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRSKGSPRVEGDEEEDGIDDLENEFDIGSNIKHDPCHIAEAMLAARFNVARNSQLNASGITTPSELDAASVAADIPLLTYGHEDVGISAEKHALIVPPFMHRGRRIHPMPFPDSSIPAQPRPMDPKKDLAVYGYGSVAWKERMEEWKKKQNEKIEVVQHEMVDDDGGKNGDEFDHPDLPKMDEGRQPLWRKLPISPSKINPYRIIIILRIAVLGLFFHYRILHPVNDAYALWMTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKVDYLKDKVDATFVKERRAIKREYEEFKVRINALVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNELPQLVYVSREKRPGFEHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPTKTCNCWPRWCCLCCGSRKKNRKVKSSAKKKIKSKDGTKQIHALENIEEGIEGIDSEKSSLMSQLKFEKKFGQSPVFITSTLMEDGGVLKGASSTSLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIMLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIVPEISNYASIIFMSLFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFAELYIFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVILHLYPFLKGVMGKHEGVPTIILVWAILLASIFSLLWVRINPFLSKSDIVLELCGLNCDD 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03260 1098 Pfam Zinc-binding RING-finger 32 105 IPR027934 -
Aip09g03260 1098 SUPERFAMILY RING/U-box 25 107 - -
Aip09g03260 1098 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Aip09g03260 1098 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Aip09g03260 1098 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Aip09g03260 1098 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 516 663 IPR029044 -
Aip09g03260 1098 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 1 1096 - -
Aip09g03260 1098 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1096 - -
Aip09g03260 1098 Pfam Cellulose synthase 370 1086 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip09g03260 1098 SUPERFAMILY Nucleotide-diphospho-sugar transferases 383 897 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03260 Aip-Chr9 138568703 138574353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g03260 1 1096 Glycosyltransferase AT5G64740 78.474 0.0 1768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03260 K10999 - gmx:100795809 1942.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03260 09 138568703 138574353 Aip09g03260 09 138568703 138574353 ECH