Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03207 ATGAAAATGTTGTTGCTTGGCACTAAGAAAATGTTCCTCCAAATTCTTTGGTGTTTTTCATTGATTAGTCTTAGTTCCCAAACGAGGAGTCATTACAACTTTGTTGTGAGAGAAGCCCGGTACACAAGACTGTGTTCCACAAAGAGCATTTTGACGGTGAATGGAAAATTTCCAGGGCCAGCTATAAAAGTCTACAAGGGTGACACAATCTATGTTAATGTTCACAACAGGGGAAAAAACAACATCACTATCCACTGGCATGGAGTGAAACAACCAAGAAATCCATGGACAGATGGTCCTGAATACATAACTCAATGTCCCATTCAACCAGGAAGGAGTTTCAGACAAAAGATAGTATTTTCAACAGAAGAAGGGACCTTATGGTGGCATGCTCATAGTGATTGGTCAAGAGCCACCGTCCATGGCCCAATCTATATCTATCCAAAGAAGAATAGTAGTGGCTATCCTTTTCCCAAACCTCAGTATGAGGTCCCCATCATACTTGGAGAGTGGTGGAAGAGTGATCTCAACAAGGTCTTCACACAATTTATTAAAAGTGGAGGAGCGCCAAACAATTCTGATGCCGTCACCATTAATGGCCAACCTGGAGATCTCTATAATTGCTCACAATCTGGGACATTCAAGTTAAATGTAGAGCATGGCAAGACCTACCATCTGCGCATAATTAATGCGGCAATGAATCTGATCCTGTTTTTCTCGGTCTCGAAACACAACCTAACACTGTTTGCTCATGATGCAATGTACACAAAGGAATTAACAACTTCTTACATTTGCATAGCTCCTGGTCAAACAATGGATGTATTATTGCATGCAAACCAAAACCCTAACAACAAATATTACATGGCTGCAAGGGCTTATTCCACTGGGGTTGGAGTTCCATTTGATAACTCCACAACCACAGCTATAATCCAATACAATAATAATAATGAAAATTCAACTCCTTCCTTTCCTTTTCTTCCAAGCCCTAATGACACAAAATCAGCTTTTGCTTTCATTAGAAGCATTAGGGGCTACCCTGAAGAAAACCCTTTTACATGCCCTTTAAATATCAAAACTCACATAGTTACCACAATTTCTGTGAACACTTTTCCATGCCCTAGAGGCCGATCACCGTCATCATGCCAAGCACCGAATTCGACGATTTTCGCCGCCAGCATGAACAACATAAGCTTTGTAACCCCACGCACTGATATCCTGGAAGCCTACTACTACCACATCAATGGAGTCTATAGAAAGGGTTTTCCGAGTTTCCCGCCATATGTGTTCAACTTCACTGGGGATTTCTTGCCTCTTGAACTCAACATACCAAAGAGAGGAACAAAGGTTAAGGTTTTGAAGTACGGTTCAACGGTGGAGGTTGTTTTCCAAGGGACCAACTTGGTTGCTGGCATAGACCATCCAATGCATATACATGGATTCAGTTTTCATGTTATTGGTTATGGTTTTGGGAATTTCAACAGGAGCAGGGACCCCAAGAATTATAATCTTGTTGATCCTCCTCTTCAGAATACTGTCATTGTGCCCATTAAAGGCTGGGCTGCCATTAGGTTTAGGGCTACCAACCCTGGAGTGTGGTTAATGCATTGCCACCTTGACCGGCACCTCTCTTGGGGCATGGAGACAGTGTTTATTGTGAAGAATGGCAAAGCCTCAAATGAAACATTACCACCTCCACCACCAGACATGCCTCCATGTTAA 1719 0.4223 MKMLLLGTKKMFLQILWCFSLISLSSQTRSHYNFVVREARYTRLCSTKSILTVNGKFPGPAIKVYKGDTIYVNVHNRGKNNITIHWHGVKQPRNPWTDGPEYITQCPIQPGRSFRQKIVFSTEEGTLWWHAHSDWSRATVHGPIYIYPKKNSSGYPFPKPQYEVPIILGEWWKSDLNKVFTQFIKSGGAPNNSDAVTINGQPGDLYNCSQSGTFKLNVEHGKTYHLRIINAAMNLILFFSVSKHNLTLFAHDAMYTKELTTSYICIAPGQTMDVLLHANQNPNNKYYMAARAYSTGVGVPFDNSTTTAIIQYNNNNENSTPSFPFLPSPNDTKSAFAFIRSIRGYPEENPFTCPLNIKTHIVTTISVNTFPCPRGRSPSSCQAPNSTIFAASMNNISFVTPRTDILEAYYYHINGVYRKGFPSFPPYVFNFTGDFLPLELNIPKRGTKVKVLKYGSTVEVVFQGTNLVAGIDHPMHIHGFSFHVIGYGFGNFNRSRDPKNYNLVDPPLQNTVIVPIKGWAAIRFRATNPGVWLMHCHLDRHLSWGMETVFIVKNGKASNETLPPPPPDMPPC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03207 572 CDD CuRO_1_LCC_plant 32 148 IPR034288 GO:0005507
Aip09g03207 572 Pfam Multicopper oxidase 36 150 IPR011707 GO:0005507
Aip09g03207 572 TIGRFAM laccase: laccase 30 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip09g03207 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Aip09g03207 572 SUPERFAMILY Cupredoxins 28 173 IPR008972 -
Aip09g03207 572 SUPERFAMILY Cupredoxins 157 329 IPR008972 -
Aip09g03207 572 CDD CuRO_2_LCC_plant 164 312 IPR034285 -
Aip09g03207 572 PANTHER MULTI-COPPER OXIDASE 35 572 IPR045087 -
Aip09g03207 572 Pfam Multicopper oxidase 441 555 IPR011706 GO:0005507|GO:0016491
Aip09g03207 572 Gene3D - 161 345 IPR008972 -
Aip09g03207 572 Pfam Multicopper oxidase 164 315 IPR001117 -
Aip09g03207 572 SUPERFAMILY Cupredoxins 383 572 IPR008972 -
Aip09g03207 572 Gene3D - 377 572 IPR008972 -
Aip09g03207 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Aip09g03207 572 Gene3D - 19 148 IPR008972 -
Aip09g03207 572 PANTHER LACCASE-15 35 572 - -
Aip09g03207 572 CDD CuRO_3_LCC_plant 416 555 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03207 Aip-Chr9 137724927 137729853 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03207 K05909 K19791 gmx:100817468 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03207 09 137724927 137729853 Aip09g03207 09 137724927 137729853 ECH