Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03206 ATGGGGCACCATAAGTTTGTGGTGAGAGATGCTCCCTTCACAAAGCTTTGCAGTGCAAAGAACATCTTAACAGTAAATGGAGAATTTCCAGGGCCAACATTGTATGTTACGAAAGGAGAAAGCATAATTGTTGATGTGTATAACAGAGCAAACTATAACATCACTATTCATTGGCATGGAGTGAACCAACCAAGATATCCATGGTCCGATGGCCCTGAATTCATCACTCAGTGTGCCATTCAACCTGGTGGTTTGTTCTCTCAAAAGGTTATCTTTTCTGAAGAGGAAGGCACACTTTGGTGGCATGCTCACAGTGATTGGTCTCGTGCTACTGTTCACGGTGCTATTGTCATTAAACCCAAGCCTGGAAATACATATCCATTTCCAATGCCAGATAGAGAGGTCCCCATTATACTAGGTGAATGGTGGAAGGAAGACATTGTCCAAGTTTTCAATAACTTTGAAACGGGGGGAGGAGATCCTGTTGTTTCAGATGCTTATACTATCAATGGCCAACCTGGTGATCTTTATAATTGCTCAAACAATGAAACCTTCAAACTAAATGTGGAACATGGCAAGACATATCTTCTGAGAATGGTGCATGCTGGAATGCAAGACCTTCTCTTCTTTGCAATTGCGCAGCACCAATTGACAGTGGTGGGAAGCGATGGAAGCTATGTGAAGCCATTCAAAGTGGATTACATAACAATATCACCAGGTCAAACCATGGATGTGTTGCTTGAAGCTAATCAACCTTTGGATCGTTATTACATGGCTGCCAAAGTGTATTCAAGTGCTTCCAATGTTGCATTTGACAACACAACCACCACAGCCATTCTGCAATACGAAAAGGGAAAACAAATTATTCCATCATTTTCATCAAGAACCCCTCACATGCCTTCACTTCCATCTTCCAATGACACCAATGCATCTATCAACATGATAAGTCAAATGAGAAGCTTAGCAGATGAAGCACATCCAATTGATGTGCCATTGAACATAACCACCAACCTGTTCTACACAGTTTCGGTGAATACATTACCATGTTCAACATGCGAAGGTAGTCATATACCAGGGAACCGCCTTGCAGCAAGTGTAAATAACATAAGCTTCCAATTGCCATCGGGAAACAACATTTTGAATGCTTACTATAACCACCTTCAAGGTGTATATACACAAGATTTTCCAGATGTGCCACCAGAACTATTTGATTTCACTTCTTCCAATTTGTCCACATTTCTTAGAACTCCATCGGTAGATACAGAGGTGAAGGTGCTTGAGTATGGGTCCACGGTGGAGCTTGTTCTTCAAGGGACTAATTTGCTGGCTGGTACTGAGCATCCAATGCACTTTCATGGTCATAGTTTCTATGTAGTTGGATGGGGATTCGGAAACTTTGACAAAGATAAAGATCCTTTCACTTATAATCTTGTTGATCCTCCTTATCAGAATACCGTCGCTATACCCAAAAATGGATGGGTAACCATAAGATTCAAGGCACAAAATCCAGGTGTGTGGTTCATGCATTGCCACTTAGAGCGACATAAGCCTACATTCATCCATCTGGGCGCACAGGAAGAACAGGAAATACGGGAGTTGCTGTAA 1605 0.4187 MGHHKFVVRDAPFTKLCSAKNILTVNGEFPGPTLYVTKGESIIVDVYNRANYNITIHWHGVNQPRYPWSDGPEFITQCAIQPGGLFSQKVIFSEEEGTLWWHAHSDWSRATVHGAIVIKPKPGNTYPFPMPDREVPIILGEWWKEDIVQVFNNFETGGGDPVVSDAYTINGQPGDLYNCSNNETFKLNVEHGKTYLLRMVHAGMQDLLFFAIAQHQLTVVGSDGSYVKPFKVDYITISPGQTMDVLLEANQPLDRYYMAAKVYSSASNVAFDNTTTTAILQYEKGKQIIPSFSSRTPHMPSLPSSNDTNASINMISQMRSLADEAHPIDVPLNITTNLFYTVSVNTLPCSTCEGSHIPGNRLAASVNNISFQLPSGNNILNAYYNHLQGVYTQDFPDVPPELFDFTSSNLSTFLRTPSVDTEVKVLEYGSTVELVLQGTNLLAGTEHPMHFHGHSFYVVGWGFGNFDKDKDPFTYNLVDPPYQNTVAIPKNGWVTIRFKAQNPGVWFMHCHLERHKPTFIHLGAQEEQEIRELL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03206 534 SUPERFAMILY Cupredoxins 4 145 IPR008972 -
Aip09g03206 534 Gene3D - 12 127 IPR008972 -
Aip09g03206 534 CDD CuRO_1_LCC_plant 4 120 IPR034288 GO:0005507
Aip09g03206 534 PANTHER LACCASE 7 516 - -
Aip09g03206 534 TIGRFAM laccase: laccase 3 516 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip09g03206 534 PANTHER MULTI-COPPER OXIDASE 7 516 IPR045087 -
Aip09g03206 534 Pfam Multicopper oxidase 11 121 IPR011707 GO:0005507
Aip09g03206 534 Gene3D - 132 323 IPR008972 -
Aip09g03206 534 Pfam Multicopper oxidase 134 284 IPR001117 -
Aip09g03206 534 Gene3D - 350 518 IPR008972 -
Aip09g03206 534 CDD CuRO_2_LCC_plant 135 282 IPR034285 -
Aip09g03206 534 Pfam Multicopper oxidase 396 515 IPR011706 GO:0005507|GO:0016491
Aip09g03206 534 SUPERFAMILY Cupredoxins 128 322 IPR008972 -
Aip09g03206 534 SUPERFAMILY Cupredoxins 356 515 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03206 Aip-Chr9 137630042 137633545 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03206 K05909 - qsu:112034097 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03206 09 137630042 137633545 Aip09g03206 09 137630042 137633545 ECH