Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03203 ATGAGAATCACACCATCGGTCCTACAGTTCTTAGGAATTTTGTTCCTAAATGTTCTTATCACTACCCAGGCTTTGAGGCATTACAAGTTTGTGGTGAGAGATGCTCCCTTCACAAAGCTTTGCAGTGCAAAGAACATCTTAACAGTAAATGGAGAATTTCCAGGGCCAACATTGTATGTTACAAAAGGAGAAAGCATAATTGTTGATGTGTATAACAGAGCTAACTATAACATCACCATTCACTGGCATGGAGTGAACCAACCAAGATATCCATGGTCTGATGGCCCTGAATTCATCACTCAGTGTGCCATTCAACCTGGTGGTTTGTTCTCTCAAAAGGTTATCTTTTCTGAAGAGGAAGGCACACTTTGGTGGCATGCTCACAGTGATTGGTCTCGTGCTACTGTTCACGGTGCTATTGTCATTAAACCCAAGCCTGGACATACATATCCATTTCCAAAGCCAGATAGAGAGGTTCCAATGATATTAGGTGAATGGTGGAAGCAAGATGTTGTCAAAGTTTTTGATGATCTTGTTTCAACTGGAGCAGATGCTGCCATCTCTGATTCTTACACTATCAATGGTCAACCTGGTGATCTTCATCCATGTTCTGCCAATGAGACCTTCAAACTAAATGTGGAACATGGCAAGACTTATCTTCTGAGAATGATCAATGCTGCAATGCAAGACCTTCTCTTCTTTGCAATCGCTAAACATCAATTGACAGTGGTTGGAAGCGATGGAAGCTATGTGAAGCCATTCAAAGTGGATTACATAACAATATCACCAGGTCAAACCATGGATGTGTTGCTTGAAGCTAATCAACCTTTGGATCAATATTACATGGCTGCCAAAGCCTATTCAAGTGCTTTCAATGTTAGATTTGATAACACAACAACCACTGCTATTCTTCAATACAAGAAGGGAAACTACATTATTCCATCTTCAATAAGCACTCCTCACATGCCTTCACTTCCATCTTTCAATGACACCAATTCCTCTGTCAACATCATAACTCAAATGAGAAGCTTGGCAGATGAAGCACACCCAGTTGACGTGCCATTGAACATAACAACCAATCTGTTCTACACCGTTTCAGTTAACTCATTGCCATGTCCAAATGGTACCATATGCAAAGGCCCTCGTGGAAATAACCGGTTTGCAGCAAGCATGAACAACGTCAGCTTCCAGTTACCACAAAACAATAACATTAACATCTTGCAGGCTTATTATAACAACATAAGTGGTGTGTTCAGTGAAAATTTTCCAGATGTGCCACCACTACTATTTGATTTCACTGCTTCCAATTTGTCCACATTTCTTAGAACTCCATCGGTAGATACAGAGGTGAAGGTGCTTGAGTATGGCTCCACGGTGGAGCTTGTTCTTCAAGGGACTAATTTGCTGGCTGGTACTGAGCATCCAATGCACTTGCATGGCCATAGTTTCTACGTAGTTGGATGGGGATTTGGAAATTATAACAAAGACAAAGATCCTTTCAACTATAATCTCGTTGATCCTCCTTATCAGAATACAGTGGCTGTACCTAAAAATGGTTGGGTAGCCATAAGATTTCAGACCAAAAATCCAGGGGTATGGTTCATGCACTGCCATTTAGAGCGACATGTAAGTTGGGGCATGGCTATGACTTTCATCGTCAAAAATGGTAACAATCCTGGACAACAAATGCTGCCACCCCCTCCAGACATGCCACGCTGCAACTAA 1725 0.4162 MRITPSVLQFLGILFLNVLITTQALRHYKFVVRDAPFTKLCSAKNILTVNGEFPGPTLYVTKGESIIVDVYNRANYNITIHWHGVNQPRYPWSDGPEFITQCAIQPGGLFSQKVIFSEEEGTLWWHAHSDWSRATVHGAIVIKPKPGHTYPFPKPDREVPMILGEWWKQDVVKVFDDLVSTGADAAISDSYTINGQPGDLHPCSANETFKLNVEHGKTYLLRMINAAMQDLLFFAIAKHQLTVVGSDGSYVKPFKVDYITISPGQTMDVLLEANQPLDQYYMAAKAYSSAFNVRFDNTTTTAILQYKKGNYIIPSSISTPHMPSLPSFNDTNSSVNIITQMRSLADEAHPVDVPLNITTNLFYTVSVNSLPCPNGTICKGPRGNNRFAASMNNVSFQLPQNNNINILQAYYNNISGVFSENFPDVPPLLFDFTASNLSTFLRTPSVDTEVKVLEYGSTVELVLQGTNLLAGTEHPMHLHGHSFYVVGWGFGNYNKDKDPFNYNLVDPPYQNTVAVPKNGWVAIRFQTKNPGVWFMHCHLERHVSWGMAMTFIVKNGNNPGQQMLPPPPDMPRCN 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03203 574 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Aip09g03203 574 Gene3D - 155 346 IPR008972 -
Aip09g03203 574 Pfam Multicopper oxidase 35 145 IPR011707 GO:0005507
Aip09g03203 574 Gene3D - 16 144 IPR008972 -
Aip09g03203 574 Gene3D - 379 574 IPR008972 -
Aip09g03203 574 TIGRFAM laccase: laccase 25 573 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip09g03203 574 PANTHER MULTI-COPPER OXIDASE 13 573 IPR045087 -
Aip09g03203 574 SUPERFAMILY Cupredoxins 381 573 IPR008972 -
Aip09g03203 574 CDD CuRO_3_LCC_plant 417 556 IPR034289 GO:0005507
Aip09g03203 574 ProSitePatterns Multicopper oxidases signature 1. 531 551 IPR033138 -
Aip09g03203 574 SUPERFAMILY Cupredoxins 152 346 IPR008972 -
Aip09g03203 574 PANTHER LACCASE 13 573 - -
Aip09g03203 574 Pfam Multicopper oxidase 158 308 IPR001117 -
Aip09g03203 574 Pfam Multicopper oxidase 423 556 IPR011706 GO:0005507|GO:0016491
Aip09g03203 574 CDD CuRO_2_LCC_plant 159 306 IPR034285 -
Aip09g03203 574 SUPERFAMILY Cupredoxins 18 168 IPR008972 -
Aip09g03203 574 ProSitePatterns Multicopper oxidases signature 2. 536 547 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03203 Aip-Chr9 137603335 137605313 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03203 K05909 - qsu:112034097 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03203 09 137603335 137605313 Aip09g03203 09 137603335 137605313 ECH