Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g03146 ATGGGAGACCGCAGAAAAAAGCACCGTCGTCTACCCGACTCCCCCACCTCTTCATCCCAATCTGAATCCGACACTGAATCCGACTCCCAATCTGAATCTGAATCCGACTCCGATCGCCCTTCCAGGCGCCGCGGCCGAAGCCGCCGCGAAAAGGACCGCCGCAGGCGGAAGGAGAAGGAGGACGAGGAGCGCAGGAGGAGAAGGAAGAAGAAGGAGAAAAAGAAGAAGAGGAGGGATAGAGACATGAAATCCAGGAAAAGTAACAAGAGGCTCCGTGATTCTGATGCTTCTGAATCTTCGGATGAGGATGAAGAGAGGTCACCTAGGGTTGAGCCTCATGCTGTGGTCCGTGAAATCATGATCGAGTTCCCCAATGTTGCCACTGATTTGAAGCAGCTCTTGCAAATGATTGATGATGGACAAGCCGTTGATATAAAGGGTATATCAGAAGAATCTCTCATGAAGCATCTGAAGAAGCTGTTCCTATCACTAAAGCTGAAGGAAAATGGAGATAGAGTTTTCTTACTTCCTTCTAAAGCTCACCCCACTTTGGATGTTGTTGGCCCTATAATTCACTCTTTTATGGATCCTATGAAGGAGCAAGCTGATGCTTCTGCAGCGATACCTGAAACAAGTTCAGTTCCAGTAGATGCAGGGAGTGAGCAGGCGGCAAATGAGCACATAACAGGAAATCCAGATGATAATTCTCCTGGTCCTAGAAAAAGGATGATTGGTCCTGCAATGCCATCTGCTGAGTTACTTGCTGCTGCCGCCAAATTAACAGAAGCACAGACTGAGCTTAATGAAGCTGAGTTGGACGACGATACTGAACTATTTGTGGGACCTCCACCACCTGCTATGGTTTCTGAAGCAGAATCAGCTAATGAAGCAGAGCGTTTTGAAGAGGTCACCAGGATCATGGAAGTTGAGGCTGACAGCCCATATGATGTTCTAGGAGTTAACCATAATATGTCGAGTGATAACATAAAGAAAAGGTATTGGAAGATGTCACTTTTGGTTCATCCAGATAAATGCTCTCATCCTCAAGCCCATCAAGCATTTATTAAGTTAAATAAAGCTTTCAAAGAGTTACAGGATCCAGAAAAGCGGAAAGCAATGGATGAGAAGATCAAGCTCAAGGAAGAACAGGAGCAGTTTAAGGTTGAACTTAAAGCTATGCGTGAGGCTGCACTTTGGAGAAGAACGCAAGGTATATCAATGGAGGGCGATGATGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAGCCAAAAAGAGATGAATGGATGACAACATTGCCTCCAGAGAGGAAACCCGGTGGTGTAACTATGCAATCAACCAAGTTTAGTCGGGGCACAAAGGAAGGTCGAGGAGATACTAGCATTTGGACAGACACCCCTTCTGACAGAGCCCAAAAGGCGAAGATGAATTATTTGGAAGCATACAATGAAGCTACTGCGCTTGCCTCGAATGAAGAGGAAAAGAAAAAGGCTAGTGCGGATGCAGAGTTGGTGGACAAATACAACAAGGCAAAACGATCAAAAACGTTGATGCAGAAGCATCAAGAAGAGGTTTCTAACAAGTCCAAGAAAAAATCGAAGCAGCAGAAGCCAGAGAAGGAAGAGTGGGTGGGTCAACATCCATGGAAGCCGTGGGACCGCGAAAAGGATCTGACAGCTGGAAGGAAAAGTGTAAAACTTGATGCAGAAGGCATGTCGCAGGGCTTATCTTCAAGGTTTTCTTCCGGAAACTTCCAGAGAAACTTTCTATGA 1770 0.461 MGDRRKKHRRLPDSPTSSSQSESDTESDSQSESESDSDRPSRRRGRSRREKDRRRRKEKEDEERRRRRKKKEKKKKRRDRDMKSRKSNKRLRDSDASESSDEDEERSPRVEPHAVVREIMIEFPNVATDLKQLLQMIDDGQAVDIKGISEESLMKHLKKLFLSLKLKENGDRVFLLPSKAHPTLDVVGPIIHSFMDPMKEQADASAAIPETSSVPVDAGSEQAANEHITGNPDDNSPGPRKRMIGPAMPSAELLAAAAKLTEAQTELNEAELDDDTELFVGPPPPAMVSEAESANEAERFEEVTRIMEVEADSPYDVLGVNHNMSSDNIKKRYWKMSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKLKEEQEQFKVELKAMREAALWRRTQGISMEGDDELLAQTEVKVEPKRDEWMTTLPPERKPGGVTMQSTKFSRGTKEGRGDTSIWTDTPSDRAQKAKMNYLEAYNEATALASNEEEKKKASADAELVDKYNKAKRSKTLMQKHQEEVSNKSKKKSKQQKPEKEEWVGQHPWKPWDREKDLTAGRKSVKLDAEGMSQGLSSRFSSGNFQRNFL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g03146 589 MobiDBLite consensus disorder prediction 514 589 - -
Aip09g03146 589 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 589 - -
Aip09g03146 589 MobiDBLite consensus disorder prediction 1 111 - -
Aip09g03146 589 Pfam DnaJ domain 314 374 IPR001623 -
Aip09g03146 589 Coils Coil 369 396 - -
Aip09g03146 589 MobiDBLite consensus disorder prediction 442 466 - -
Aip09g03146 589 MobiDBLite consensus disorder prediction 86 111 - -
Aip09g03146 589 ProSiteProfiles dnaJ domain profile. 313 377 IPR001623 -
Aip09g03146 589 Pfam Protein of unknown function (DUF3752) 433 580 IPR022226 -
Aip09g03146 589 MobiDBLite consensus disorder prediction 217 242 - -
Aip09g03146 589 Coils Coil 59 79 - -
Aip09g03146 589 MobiDBLite consensus disorder prediction 514 563 - -
Aip09g03146 589 PRINTS DnaJ domain signature 315 333 IPR001623 -
Aip09g03146 589 PRINTS DnaJ domain signature 333 348 IPR001623 -
Aip09g03146 589 PRINTS DnaJ domain signature 349 369 IPR001623 -
Aip09g03146 589 MobiDBLite consensus disorder prediction 217 232 - -
Aip09g03146 589 MobiDBLite consensus disorder prediction 573 589 - -
Aip09g03146 589 CDD DnaJ 314 366 IPR001623 -
Aip09g03146 589 MobiDBLite consensus disorder prediction 68 85 - -
Aip09g03146 589 MobiDBLite consensus disorder prediction 431 466 - -
Aip09g03146 589 SUPERFAMILY Chaperone J-domain 288 371 IPR036869 -
Aip09g03146 589 Coils Coil 253 273 - -
Aip09g03146 589 SMART dnaj_3 312 369 IPR001623 -
Aip09g03146 589 Gene3D DnaJ domain 296 397 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g03146 Aip-Chr9 136692060 136697263 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g03146 - - aip:107618276 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03146 09 136692060 136697263 Aip09g03146 09 136692060 136697263 ECH