Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g02238 ATGGTTGTTGGGAAACCATTGGCGGCAGGACGCCTATCCATTTCATGGAATCCGTGGAATCTGAATGTTAAGCCAATTCCACTTGCCACATTCAACTTCGCTCTTCGGTTGCAACCACCAACTTACCTCAATTTCCATGTTAGAGCATCTTGTTTTCCCGCTTCTTCCCCTCTTCCCCAGAACGATGATCTCCAAGCTCTCTTACAGATTCTTCCATCCGATTTGCATGACAATCTCCTCAATGAACCGGACAGGGCTCAACTCTTAGAGGTTATATTGGATTTGGGTCGTTTGCCAGAGGCACGTTATCTTGGTAAAGAAGGAGGGCAATATATAAGGGAGTCTGAGGTAACTGTGAAAGAGCTGGAATATGCTCGACAAGCTGTTGGAGAGTTCGGCAGGGACAATAGAGCCGGCATCGAGGGTACATTGCACAGAATATCTGCAATACGAAGTAGGAAAGGTGGCATAGTTGGCTTGACATGCCGAGTTGGAAGGGCAGTCAGTGGCCAGATTAACATGGTTTATGACCTGCTTCAATACTGGAAGAGCATTTTATTTGTGGGAAGGCCTGGGGTTGGTAAGACTACTGTTATACGAGAGATTGCTCGTGTACTGTCAGATGAATTTCACAAGAGAGTGGTAATTGTTGATACCAGCAATGAAATCGGAGGTGATGGCAATATTCCGCATGCTGCAATAGGGAGTGCACGAAGGATGCAGGTACCTGAGCCATCAATGCAACATAGAGTGATGCTTGAGGCAGTAGAAAATCATATGCCTCAGGTGATTATAGTTGATGAGATTGGCACAGAAGCCGAAGCTCATGCTTGCCGATCAATTGCTGAGAGAGGAATCATGCTTATCGGGACTGCTCATGGACAACAACTTGAGAATATCATGAAGAATCCAACACTCTCGGATCTGATTGGTGGAATAGGAGCTGTTACTCTGGGAGATGCAGAAGCTAGAGCAAGAAATTGTCAGAAGACAATTCTTGAAAGGAAAGCTCCTCCAACATTTGATTTCCTGATCGAGATGAGAGACAGATACTACTGGCTTACACATCAGACAGACAAAAGTGTTGATATGTTGCTTAGAGGCAAAATTCCTCAAGTTGAGGTAAGAAAAAGAGATGAAAAATGCAAGGGAAACGAAACACTTCACATTCCACCCACACCTCCTGAACCCTATCGATCATTTCTCCTCTATTCTTCGCGCTTGAGTACAAAGGAAGAAGACGGATTGAAGCGAGTTGGTGGTTTGGTGCTCCCTACACACGAGAGCTTTGCCCCGTCTTGGTGGGTTTCTGCGATTGCAATGTTATTGCTTTTAGGGTTTGGGGTTTTTGATGGGATGTTTCGGTTTGAAGGAGGTATTGTTAGGTATTTGGGTGGGGAGACGTCCATTGTAGACTACTGTGATGAGGATGAATGGAGTTTGATTGAGGTGTATGAAATAATGCAATGGATATGGCAAGAATTGGGGGTAAAGGATGACATGGTTGAGGTTTATGTTGTGCACAAGACAAGTGAGGTGGGAGAAGTTGTGCAACCTGGGAAAATTACTGCTCCTGTTGAAGAAGGTGATCAAGCTGGGCCTGGCCCAATTATTGTGTATGATGGCCCTGGTGTTGGGTCAAAGGCAGCTACTGATGGGCCAACTGATGGGCCTACTGATGGGCCTACTGATTGA 1695 0.4555 MVVGKPLAAGRLSISWNPWNLNVKPIPLATFNFALRLQPPTYLNFHVRASCFPASSPLPQNDDLQALLQILPSDLHDNLLNEPDRAQLLEVILDLGRLPEARYLGKEGGQYIRESEVTVKELEYARQAVGEFGRDNRAGIEGTLHRISAIRSRKGGIVGLTCRVGRAVSGQINMVYDLLQYWKSILFVGRPGVGKTTVIREIARVLSDEFHKRVVIVDTSNEIGGDGNIPHAAIGSARRMQVPEPSMQHRVMLEAVENHMPQVIIVDEIGTEAEAHACRSIAERGIMLIGTAHGQQLENIMKNPTLSDLIGGIGAVTLGDAEARARNCQKTILERKAPPTFDFLIEMRDRYYWLTHQTDKSVDMLLRGKIPQVEVRKRDEKCKGNETLHIPPTPPEPYRSFLLYSSRLSTKEEDGLKRVGGLVLPTHESFAPSWWVSAIAMLLLLGFGVFDGMFRFEGGIVRYLGGETSIVDYCDEDEWSLIEVYEIMQWIWQELGVKDDMVEVYVVHKTSEVGEVVQPGKITAPVEEGDQAGPGPIIVYDGPGVGSKAATDGPTDGPTDGPTD 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g02238 564 PANTHER KINASE-RELATED 46 384 - -
Aip09g02238 564 Gene3D - 164 365 IPR027417 -
Aip09g02238 564 MobiDBLite consensus disorder prediction 525 564 - -
Aip09g02238 564 Pfam Sporulation stage III, protein AA 183 310 IPR045735 -
Aip09g02238 564 PANTHER EXPRESSED PROTEIN 46 384 - -
Aip09g02238 564 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 553 564 - -
Aip09g02238 564 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 189 208 - -
Aip09g02238 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 300 IPR027417 -
Aip09g02238 564 SMART AAA_5 181 337 IPR003593 -
Aip09g02238 564 CDD AAA 176 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g02238 Aip-Chr9 102612605 102618479 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g02238 - - mtr:MTR_1g076810 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g02238 09 102612605 102618479 Aip09g02238 09 102612605 102618479 ECH