Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01292 ATGGTTGCAGATGAAGTGCCACTGGACGACAAAGCAAAGCGGATGAGAGATCTGCTATCGAGTTTCTACTCTCCAGAGTCTGCCATGTCCACCGGCACCGACTCCGCCAAGCACGCCTCACCCGACGATATCAACTCCAACTCCTTCGATCCCGATCACTACATGAACCTCATGGTTCACAAGTCCAATTTGGAAGGGCTGCTTCAGCGCCACGTCGAGATGGCTGCTGAAATCAAGAATCTTGACACTGACTTGCAAATGCTGGTTTACGAGAACTATAACAAGTTCATCAGTGCTACTGATACTATAAAGAGGATGAAAAGTAACATTTCCGGGATGGAGACAAACATGGAGCAGCTTCTTGAGAAGATAATGTCTGTGCAGTCAAGGAGTGACAGCGTTAACACTTCTCTTTTTGACAAAAGGGAGCACATAGAGAAGCTGCATCGTACTTGCAATCTTCTCCGTAAAGTTCAGTTCATATATGATCTGCCTGATAGACTTAACAAGTGCATCAAATCGGAAGCTTATGCAGATGCAGTTAGGTTTTACACTGGAGCAATGCCAATTTTAATGGCATATGGAGATTCATCTTTCCGGGATTGCAAGCTAGCCTCTGAGGAAGCAATGGCTACAATAGTAAAAAACTTGCAGGGGAAGCTATTTTCAAATTCTGAATCAATACAAAAGAGAGCTGAAGCTACATTGCTCCTTAAGCAGTTGGAATATCCGGTGGACAATTTGAAGGCCAAGTTACTTGAGAAGTTAGATCAATCTCTAAAAGACATTCAACTAAAGCCTGAAGAAATAAAAGATGTATCAGTAGACCTTACTCCTTCTGATTCTGCTCATGAGGCAAGCATTAATGAATTTGTGGAAGCAGTTCGTGCTTTTCGAGTAATATTTCCTGATTCAGAAGAGCAGTTGGTTACACTTGCTAAAGACCTGGTTACCAAGTTAGTATCTATGAAGAGCTTCTTTATCTATCGTGTGTCTTTGTTAAGTTTTTCATGGTATGCAAACTTTTTTATGTTTGCTAGGAATTTTGCCATTGCTGAGGAATATGTTCAGACACGAGTTTGTGCAGCAGATCTACTTGGTGTTCTTCGAGTTATTTGGAATGACGTACTCTTGCTAGACGAAGTCTTACAAGAAGCGGCTCTCTCTAACCATTCTCTTGAGGCTGCGAAGGCTGTGGTCATGTCTTATATTAAAAGTGCATTTTCACATCTTTTGCAAGATATCTCAGATTCATTGTTGAAAGTCCTGAAAAAGGATGGAATGGGGGAGTACTCTCTGGAGGTTGCTCTTGATGCTAGTACAAAAGCTGTTCTCCAAGGAGGCATGAATATCTTGCAGGAATTTCGCAAATTGCTAGATCACAACTCTGGGATCCTAGTCAGACTAAGAGAGTTAACCATTGATTTTGTTCAAGAAGGAATTCAAGATTTTTTTAGGCAACTTGAGGATCACTTCCTTCGCTTTTCAGGAAGAAATAATTCTTCAGCTTTTAAAGATCATGGTCTTGTTGAGGGAGCTCAAGGTGATAAAGCTTTTGCTGGTCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTTATTGAACAGACTGTCATCCCAAAAATCACTGAGGCAAGGATCATTATTGAAATAGCTACTTCCTTTACTGGTGGTAGTGTTAGAGGCTATGAATATGGACCTGCCTTTCTATGCCTGTTCGACCCTTTTTACTTTCTCTATATTTACCTTATAAATGTACTATCTAGAGGTCATTGTCAAGATTTACATTTGATGTCTTACTTTCAGTATGTAAATGTGAGAACTCAGAGGATATCATTTCTCCTAAAGAAGAGGTTTTCCACTCCAAACTGGGTCAAGCATAAGGAGCCAAGGGAAGTTCATATGTTTGTTGATTTATTTCTTCAAGAGCTTGAAGCTATAGGTACTGAAGTGAAGCAGACCTTGCCTCAAGGTAAGCGTAAGCACAGAAGGACTGATAGTAATGGAAGTACTGCTTCATCAAGGCGTAACCCCTTACGAGAGGAGAAATTGAATAGATCAAATACTCAAAAGGCAAGGAGCCAGCTTTTGGAAACACATCTAGCGAAACTATTCAAGCAAAAAGTTGAAATCTTCACAAAAGTAGAATATACACAGGAATCTGTTGTTACAACCATAGTTAAATTGTCCCTTAAAAGTCTACAAGAATTTGTCCGGCTCCAGACCTTTAACCGGAGTGGATTCCAGCAAGTTCAATTGGATATTCAATTCCTGAGGATCCCTTTAAGGGAAATTGTTGAAGATGAAGCTGCAATTGACTTCTTGCTTGATGAGGTGATTGTTGCTACTGCAGAGCGGTGTCTTGATCCAATTCCATTAGAGCCTCCCATACTTGACAAACTTATACAAGCGAAGTTGGCCAAATCCAAGGAGCAAAATGCAATCCCTTCCTAA 2451 0.4076 MVADEVPLDDKAKRMRDLLSSFYSPESAMSTGTDSAKHASPDDINSNSFDPDHYMNLMVHKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNISGMETNMEQLLEKIMSVQSRSDSVNTSLFDKREHIEKLHRTCNLLRKVQFIYDLPDRLNKCIKSEAYADAVRFYTGAMPILMAYGDSSFRDCKLASEEAMATIVKNLQGKLFSNSESIQKRAEATLLLKQLEYPVDNLKAKLLEKLDQSLKDIQLKPEEIKDVSVDLTPSDSAHEASINEFVEAVRAFRVIFPDSEEQLVTLAKDLVTKLVSMKSFFIYRVSLLSFSWYANFFMFARNFAIAEEYVQTRVCAADLLGVLRVIWNDVLLLDEVLQEAALSNHSLEAAKAVVMSYIKSAFSHLLQDISDSLLKVLKKDGMGEYSLEVALDASTKAVLQGGMNILQEFRKLLDHNSGILVRLRELTIDFVQEGIQDFFRQLEDHFLRFSGRNNSSAFKDHGLVEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKITEARIIIEIATSFTGGSVRGYEYGPAFLCLFDPFYFLYIYLINVLSRGHCQDLHLMSYFQYVNVRTQRISFLLKKRFSTPNWVKHKEPREVHMFVDLFLQELEAIGTEVKQTLPQGKRKHRRTDSNGSTASSRRNPLREEKLNRSNTQKARSQLLETHLAKLFKQKVEIFTKVEYTQESVVTTIVKLSLKSLQEFVRLQTFNRSGFQQVQLDIQFLRIPLREIVEDEAAIDFLLDEVIVATAERCLDPIPLEPPILDKLIQAKLAKSKEQNAIPS 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01292 816 PANTHER UNCHARACTERIZED 1 322 IPR014812 -
Aip09g01292 816 PANTHER UNCHARACTERIZED 347 777 IPR014812 -
Aip09g01292 816 Coils Coil 103 130 - -
Aip09g01292 816 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 347 777 - -
Aip09g01292 816 MobiDBLite consensus disorder prediction 653 690 - -
Aip09g01292 816 Pfam Vps51/Vps67 44 129 - -
Aip09g01292 816 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 1 322 - -
Aip09g01292 816 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01292 Aip-Chr9 21536811 21548039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01292 K20296 - gmx:100818891 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01292 09 21536811 21548039 Aip09g01292 09 21536811 21548039 ECH
Aip06g00691 06 9177663 9183048 Aip09g01292 09 21536811 21548039 PCT