Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01272 ATGGCTTCTCCCTTATCATCGCCATCTTCTTCTTCTTCTTCTTCTCCAAGATCTAACATCTTCTATTATGCTGGATGTGAACATCACTATGAGCAGCCATATTTCCTTCAAGCTTGTTTTCTATGCAAAAAACCTCTTGGCCAAAACAGAGACATCTTTATGTATAGAGGGAACACTCCGTTCTGTAGCAAAGAGTGCAGGCAGGAACAGATGGAGATTGATGAAGCAAAAGAGAAAACGTTGAAGCTTTCTTCTTCAAAAAGAGGTGTTAGAAAATCTGAGACCAATAACCAGAATTCTACATCCGACAACACTTTAAGAACAGGCACAGTTGCTGTGGCCTAA 345 0.4029 MASPLSSPSSSSSSSPRSNIFYYAGCEHHYEQPYFLQACFLCKKPLGQNRDIFMYRGNTPFCSKECRQEQMEIDEAKEKTLKLSSSKRGVRKSETNNQNSTSDNTLRTGTVAVA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01272 114 PANTHER FCS-LIKE ZINC FINGER 3 17 114 - -
Aip09g01272 114 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 17 114 IPR044533 -
Aip09g01272 114 Gene3D - 35 102 IPR013088 GO:0006355|GO:0008270
Aip09g01272 114 MobiDBLite consensus disorder prediction 80 114 - -
Aip09g01272 114 Pfam zinc-finger of the FCS-type, C2-C2 28 77 IPR007650 -
Aip09g01272 114 MobiDBLite consensus disorder prediction 90 114 - -
Aip09g01272 114 ProSiteProfiles Zinc finger FLZ-type profile. 34 78 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01272 Aip-Chr9 21102622 21103568 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01272 - - gmx:100499981 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01272 09 21102622 21103568 Aip09g01272 09 21102622 21103568 ECH