Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01251 ATGGCGAGTATTGTTGACTCGTTCAATCTGTTCAATTTGCCAGAGGCAGTGGAAAAAATGTTGTTCCCTACTCATCATAGCCATGACCATGACCACGCTCGAGAGGGCAGGGTAGTATCAAACATTCCAGTGGATATTTTGGACAATCCCAAAGAGTATGTGTTCTTCATGGATGTTCCGGGTCTCTCCAAATCTGAAATTCAGGTAACCGTGGAAGATGAGAACGCACTTGTTATTAGGAGCAACGGGAAAAGGAAACGTGAAGACGGTGACGACGAAGGCTGCAAGTACCTAAGGCTGGAGAGGAGAGCACCACACAAATTGCAAAGGAAGTTTCGTCTGCCTGAGAACGCTAACCCCTCCGCTATCACAGCCAAGTGTGAGAACGGGGTTCTTACTGTTACTGTTGAGAAACACCCTCCACCAACGAAATCTAAAACAGTTGAAATTGCCATTGCTTGA 462 0.4632 MASIVDSFNLFNLPEAVEKMLFPTHHSHDHDHAREGRVVSNIPVDILDNPKEYVFFMDVPGLSKSEIQVTVEDENALVIRSNGKRKREDGDDEGCKYLRLERRAPHKLQRKFRLPENANPSAITAKCENGVLTVTVEKHPPPTKSKTVEIAIA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01251 153 CDD ACD_sHsps-like 45 138 - -
Aip09g01251 153 Pfam Hsp20/alpha crystallin family 45 150 IPR002068 -
Aip09g01251 153 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 153 - -
Aip09g01251 153 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 9 153 - -
Aip09g01251 153 Gene3D - 3 152 IPR008978 -
Aip09g01251 153 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 35 153 IPR002068 -
Aip09g01251 153 SUPERFAMILY HSP20-like chaperones 22 145 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01251 Aip-Chr9 20232334 20234971 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01251 K13993 - gmx:100803161 239.58