Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01231 ATGGCCTTTGCGAATGAAATCATGGCTTCTTCATCAAGAGTCCTTCTACGTAACAGTTTAAAACAGAATCAATCGCCATTCTTGGTAAGCCCTGTGTTGGTGAGGTTGAGGAAAGCTGTAAAGTTTCCTGTGGCAGCTTTAAGTGAAGATTTGCTGAGGGACCCTTCCTCTTCCTCCTCTTCCTCCTCTTCTTCTTCTTCATCTTCCACTTCGTCTTCTTCTACTACGTCTGTGCCTGTTCCTGTTTCCGTGGTACCCTCTGAGAAACCGGTGAAATTCAGAGTTAGAGCTGTGGTGACTGTGAGAAACAAGATCAAAGAAGGTTTTAAAGAGACTCTTGTGAAGCATTTTGATGCTCTTACTGACAATATTGGACAGAATATTGTTCTGGAACTTATTAGCACTGAGATTGATCCAAAAACGAAGGCGGCGAAGAAAAGCAACGAAGCAGTGCTGAAAGATTGGTCGAAGAAGATCAATGTTAAAGCAGAGAGAGTTAATTACACAGCGGAGTACATGGTTGACTCTAATTTCGGAGAGCCAGGAGCAATAACTGTGTCGAATAAACATCAACAAGAGTTCTTCTTGGAATGCATAACAATTGAAGGGTTTGCCACTGGACCTGTTCATTTCCCTTGCAATTCATGGGTACAAGTACGAAAAGATCATCCTGGAAAAAGGATATTCTTTTCCAACAAGCCCTACTTGCCTGGAGATACACCTGCTGGTCTTAGATTTTTGAGGGAAAAGGAGCTGAGGAATCTCAGAGGCGATGGAAAAGGAGTTAGAAACTTGTCTGATAGAATATATGACTTTGATACATACAATGATCTTGGAAACCCGGACAGAGCACCTGAGTTTGCAAGACCAACAATTGGAGGATCTGAGCAGTATCCCTACCCAAGACGGTGTCGTACTGGCCGTCTCCCATCTGACACTGACATGTTTGCAGAGAGCCGTTTAGAGAAACCAAATCCGATGTACGTCCCTCGGGACGAACGATTTGAAGAGTCTAAGCAGAACACATTTTCTGTGAAGAGACTCAAGGCTGTTCTCCATAACTTGATTCCTGGGCTTAAAGCTAGTATCTCTGCTGATAATCAAGATTTCAATGATTTCTCAGATGTTGATGGTCTTTACAGTAAAGGGTTACTGATTCAGTTGGGTTTACAAGATGATGTTTTAAAGAAACTTCCTTTGCCAAATGTGGTTAGCAAGATCCAGGAATCAAGCCAGGGACTTCTTAAATATGACACTCCCAAGATTATATCCAAGGACAAATTTGCGTGGCTGCGAGATGACGAATTTGCCCGCCAAGCAATTGCAGGAGTCAACCCTATTGGCATTGAGAGGCTTCAAGTTTTTCCACCGGTTAGCAAGCTTGACCCGCAAATATATGGTCCCCAAGAGTCTGCTCTTAAAGAAGAGCATATTCTAAACCAACTCAACGGCATGACTGTGCAACAGGCAATAGATGAAAATAAGCTGTTCATAATAGATTATCATGATGTTTACCTTCCATTTCTTGAAAGGATTAATGCACTTGATGGTAGAAAAGCTTATGCTACACGCACAATCTTTTTCTTGACACCGCTTGATACTCTCAAGCCTGTGGCTATAGAACTTAGCCTGCCTCCGGCCGGGCCAAGTTCCCGGTCCAAACGCGTAGTCACACCTGCCATAGATGCAACTACCAATTGGATGTGGCAGCTTGCTAAGGCACATGTTTGTGCCAATGATGCCGGGGTGCACCAACTTTACAACCATTGGTTACGCACACATGCTTGCATGGAACCATTTATTTTGGCTGCTCACAGGCAAATGAGTGCTATGCATCCGATTTTTAAGTTGTTAGATCCACACATGAGGTACACTTTGGAGATCAATGCCCTGGCTCGCCAGAGCTTAATCAATGCTGATGGAATTATTGAGAATTGCTTCACCCCTGGCCGCTACGCCATGGAAATTAGTTCTGCTTTCTACAAAAACTATTGGCGTTTTGACATGGATACTCTCCCTGCTGATCTCATTCGCAGGGGAATGGCGGAACCAGACCCATCCCAACCACATGGCCTAAAGCTTGTATTTGAAGACTACCCTTATGCTGCAGACGGTCTTTTGATCTGGTCAGCAATTGAAAACTGGGTCCGCACCTATGTGAACCATTACTACCCACATTCAAGCCTTATAATCAATGATAAAGAGCTTCAAGCATGGTACTCTGAGTCAATCAACGTGGGGCACGCAGATCGCAGCCACGAGAGCTGGTGGCCCACGTTGAACAACAGTGAGAATCTTGTCACCGTACTCACCACATTGATTTGGCTTGCGTCTGCTCAGCACGCTGCTCTTAACTTTGGCCAGTATCCTTATGGAGGGTACGTGCCGAATCGTCCCCCGTTGATGCGAAGATTGATACCGGATGAGAGTGATCCAGAATATGCCAGTTTCATTGCTGATCCACAGAAGTATTTTCTCAACGCCTTGCCTAGTTTGTTGCAAGCTTCGAAATACATGGCCGTGGTGGACACTCTCTCCACTCACTCCCCTGACGAGGAGTACTTGGGAGAGAGGCAGCAACCTTCCATTTGGTCCGGTGATGCTGAGATCGTCGAGGCCTTTTACGAGTTCTCGGCTGAGATGAGACGGATTGAGAAGGTCATTGACGGAAGGAACCGGGATAAGAAACTGAGGAACCGGTGTGGGGCAGGAGTGTTGCCTTATGAGTTGCTTGCACCAAGTTCTGAACCGGGTGTTACATGCAGAGGAGTTCCAAATAGTGTGTCCACATAA 2793 0.4529 MAFANEIMASSSRVLLRNSLKQNQSPFLVSPVLVRLRKAVKFPVAALSEDLLRDPSSSSSSSSSSSSSSTSSSSTTSVPVPVSVVPSEKPVKFRVRAVVTVRNKIKEGFKETLVKHFDALTDNIGQNIVLELISTEIDPKTKAAKKSNEAVLKDWSKKINVKAERVNYTAEYMVDSNFGEPGAITVSNKHQQEFFLECITIEGFATGPVHFPCNSWVQVRKDHPGKRIFFSNKPYLPGDTPAGLRFLREKELRNLRGDGKGVRNLSDRIYDFDTYNDLGNPDRAPEFARPTIGGSEQYPYPRRCRTGRLPSDTDMFAESRLEKPNPMYVPRDERFEESKQNTFSVKRLKAVLHNLIPGLKASISADNQDFNDFSDVDGLYSKGLLIQLGLQDDVLKKLPLPNVVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPIGIERLQVFPPVSKLDPQIYGPQESALKEEHILNQLNGMTVQQAIDENKLFIIDYHDVYLPFLERINALDGRKAYATRTIFFLTPLDTLKPVAIELSLPPAGPSSRSKRVVTPAIDATTNWMWQLAKAHVCANDAGVHQLYNHWLRTHACMEPFILAAHRQMSAMHPIFKLLDPHMRYTLEINALARQSLINADGIIENCFTPGRYAMEISSAFYKNYWRFDMDTLPADLIRRGMAEPDPSQPHGLKLVFEDYPYAADGLLIWSAIENWVRTYVNHYYPHSSLIINDKELQAWYSESINVGHADRSHESWWPTLNNSENLVTVLTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFIADPQKYFLNALPSLLQASKYMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIVEAFYEFSAEMRRIEKVIDGRNRDKKLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01231 930 Pfam Lipoxygenase 244 913 IPR013819 GO:0016702|GO:0046872
Aip09g01231 930 Gene3D - 339 427 IPR027433 -
Aip09g01231 930 Gene3D - 236 338 - -
Aip09g01231 930 Gene3D - 563 929 - -
Aip09g01231 930 PRINTS Plant lipoxygenase signature 201 219 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 227 248 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 266 282 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 299 318 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 367 388 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 415 431 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 454 473 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 521 545 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Plant lipoxygenase signature 842 856 IPR001246 GO:0016491
Aip09g01231 930 PRINTS Lipoxygenase signature 566 583 IPR013819 GO:0016702|GO:0046872
Aip09g01231 930 PRINTS Lipoxygenase signature 584 601 IPR013819 GO:0016702|GO:0046872
Aip09g01231 930 PRINTS Lipoxygenase signature 604 624 IPR013819 GO:0016702|GO:0046872
Aip09g01231 930 ProSiteProfiles PLAT domain profile. 109 231 IPR001024 GO:0005515
Aip09g01231 930 CDD PLAT_LH2 93 232 IPR042057 -
Aip09g01231 930 SMART LH2_4 93 232 IPR001024 GO:0005515
Aip09g01231 930 PANTHER LIPOXYGENASE 74 929 IPR000907 GO:0016702|GO:0046872
Aip09g01231 930 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 74 929 - -
Aip09g01231 930 ProSitePatterns Lipoxygenases iron-binding region signature 2. 611 621 IPR020834 GO:0016702|GO:0046872
Aip09g01231 930 Pfam PLAT/LH2 domain 145 230 IPR001024 GO:0005515
Aip09g01231 930 Gene3D - 428 561 - -
Aip09g01231 930 MobiDBLite consensus disorder prediction 283 304 - -
Aip09g01231 930 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 93 235 IPR036392 GO:0005515
Aip09g01231 930 SUPERFAMILY Lipoxigenase 237 929 IPR036226 -
Aip09g01231 930 Gene3D PLAT/LH2 domain 74 235 - -
Aip09g01231 930 MobiDBLite consensus disorder prediction 52 82 - -
Aip09g01231 930 ProSitePatterns Lipoxygenases iron-binding region signature 1. 584 598 IPR020833 GO:0016702|GO:0046872
Aip09g01231 930 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 234 930 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01231 Aip-Chr9 19480705 19488095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01231 1 929 Acyl Lipid Metabolism Gene Families AT1G17420 70.501 0.0 1373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01231 K00454 - gmx:100793614 1561.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01231 09 19480705 19488095 Aip09g01231 09 19480705 19488095 ECH