Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip09g01205 | ATGGGGGTTTCCTTCAAAGTTTCAAAGACTGGCACTAGGTTTCGCTCCAAGCCCCTTCCCGCTCATCCCGAACCTTCCAGCGATGGCACCTCCCAGAATTCAATGTCAATTTCCCGCGAGCCACAGAGTGATCTCTCCGTGGCTGGCAAAAACTGGGGTCAGATGTCCACTTTGTCCATTCCATCTGAACCTCTTTCATTAGCAGATGCGGAAGCTTCTTTCACATTGAACCTGTTCCCAGATGGTTATTCTATTGGAAAACCCTTCGAGAATGAGATAGCAAACCATGCTAAGTATCAAGATTTCCCCAAGTTGTTACATCCATATGATAGGTCATCTGAAAGCCTTTTCTTGGCTATAGAGTCAGGCCACTTACCTGCAGACATTCTGGATGATATACCTGTCAAATATGTTGATGGAGCACTGATATGTGAGGTGCGTGATTTTCGAAGATGTGCTTCAGAAAACGGGGCTGGTGTTGTGTCCACTGACATGTCTCCTGTTGTTAATAAAGTATGCCTCAAGATGTCATTAGAGAATATTGTGAAGGACATCCCATCTATCACTGATAAGTCTTGGACATATGGTGATCTAATGGAAGTTGAATCGAAGATACTGAAAGCTGTACAACCAAAACTTCATCTAGATCCTACTCCAAAGCTAGATCGGCTGTGTGAAAGTAGAGCTCCCACAAAGCTTAATTTGAATCTGGGCACTTTGCGGAGAAAACGATTAAGGCATATTCCAGAGTTTGCTGTTACTTCTAATAATGAAATCCATGGTAGGAAAGTATGCACGGAAATAATGCCAGAAAGCTCAAATAGCAGGTTGGGTGATTCAGGTATGGTTGCATCTAATGCCATTTTGCAGCAGACCCTTGAAAATCCAGCAACGCAAAATTTTAATCCACAAATTGCTATGGCCTTGAGACCCAAGACTTTCATACCAGATTCCTCTGTCCCAGGATTTTCTATGTTGTCTAATCAATCAAGGTATCAAATGGCATCTGCTGCTATTAATCAATCTGGGGCATCTCCTGCTTCACAGGATGCCATGATTTCATATGCTGATAATACAAACTCAAATGCCTCCATTCATGCAAAACGGGATAGTCAACATGGACAAACATCACCTTTATCCAATCTTGCAAAAAGAATGAGGCATTCTTCCGCAGGTGTTGACACAATGCAACAGCAGCCAGTTAGCACACATTCTGAAGCTCTTCAAGGATCGGATATGAACTGGCAGAATCCATTATTGCCACAACAAGCAATGACCAGAGGTATTCAGTATGTGAGCAGTGGTAATCAGAAATTTTCCCAGAAGGTATTTGAAGGGGTGCTGAATCAAGATCAGGGGGCTGTTCATTTGGCTTCTGGTCAGCATGGTATCAGATTAGTTGCAAAGGAAGAACAGTTTGAAATGGATAAATTAGATGGCACAGAAATGAACCGCAGTATGCAAATGGAGACAAGCAATCTAGATTCCCAACAGTTGCTGCTTCAGCAACGGTTGCCACAGGCATTCATGAGACCGAATTTCCCTCAGACAACCTGGAATGCTATGGGTCAGCATATGGAGAAAGAAGCGAAAAAAGAAGACCAGGTTGTTCAGAAAAGGAAGTCAATACAGAGTCCTCGTTTATCTAGTGGGGCATTACCTCATTCGCCATTATCTTCAAAATCAGGAGAACTTTCGAATGGTTCAGTTGGACCAAGTTTTGGACAATCTGCAATGACAGCTGTAGCTGGTGCATCACAAAAGGAGAAGATATCAATGGCTTCAGTTCCTGCTGCTGTTGGAACACCACCTTTGACTTCTAATGCTAATGATTCTGCACAAAGACAACACCAGGCACAACTGGCTGCCAAACGGAGATCTAATTCCCTTCCCAAGACCCCAGCAATGAATGGAGTTGGTTCTCCGGCTAGTGTTGGTAATGGGGTTCCATTGAATGCAAATAGTCCTGCAGTTGGTACCCCTGCTATGGTTGATCAAGGTCTTCAAAATATGCTTGAAAGGTTCTCAAAAATTGAACTGGTCACAACGAGGCTTCAACTGAACTTAAAGAAGAACAAGTCTGATGATTATCCCATAAGAAAGCAGAATACATATTCACCTCAGCATTTGTCAGCTTTTCTTGCCAATCCAAACAATAATGAAGGATTGATAGAGGAAACAAGTTCTTTGTCAAAGTCGCTCATAGGTGGAAGTATGAATGTCTGCAAAATGAGAGCTTTAAGTTTCTGCTTGCCGGAACGTGTACTCCAAGGAAATGTTGTCTCTTTAGTTCCCAGGTTACGAATTAGGATGATAATGGCTGAGAAGCCATCTGATGGTACCGTGGCTATGCATTATGGGGACATTGATGAGGGGGATTTCCTAGCCTCAGAGGAACATCTCCCCACATTACCCAACACTCATTGTGCGGATTTGCTTGCAAAACAGTTCTGCTCCCAGATGGCACGTGAAGGATATATGAAGGAAGATGACCGAATCCAAATCATGCCAAACCGGGTAAACTTTCAAGCAGGAAGTCAATCTAGTGTACCTCCGAATAACTCTGTAGTTGAAATGCAGCAATATGGAGACCCAACTATTGGTCAATCATCCAATGAATTTGCAAAACCGGCTAGTAACAGTAATGCCTCTTTAAACTTACCTCAGAATCTTGTGGCAAACCCAAGGATGCTACCACCTGGAAACCCTCAGGCCTTACAGATGTCACAAGGACTTCTCTCTGGTGTTTCAATGGCACCAAGACCACAGCAGCTGGAGGCACAAGCACTACAGCAGCAGCAACAGCAGCTACAACAACACACCCTCATTCAACAGCAGAATCCTCAATTCCAGAGGTCTATGATTCTAGGAACAAATCAATTTCCACACTTAAATGCAATTGGCCAGAACTCCAACATATCATTGGGTAATCACATGCTCAGCAAGTCTTCACCTCTACAAATTCAGATGTTACAGCAGCAACAGCAACAGAACCAACAGCCGCAAATGCAAAGAAAAATGGTGGGATTGGGAACAACTGTGGGTTTGGGTAACATGAGAAATAACATAGTTGGGCTTGGACCCATGGGTAATCCTATGGGAATGGGAGTGGGGCGAGGTATAGGAGGAACTGGAATCTCTGCACCAATGACATCCATTTCTAGCATGGGAAATATGGGTCAGAGCCCAATGAATCTTAATCCAGCCTCAAATATTTCGAATGCAATAAGCCAACGGTTAAGGTCTGGAAGTATTACTCCGTCACAGGCTGAAATGTTGGCATCGAAGCTTCGAATGACACATAATGGAAGCATGTTAGGATCTCCTCAGTCTAGCATAGCTGGCATCTCAGGCTCCAGACAAATTCACCCTGGTTCTGCTGGTCTTATGTTGGGTCAATCTCTGAGTAGGAGTATGAATACACTTCCACGAGCTGTTGGACCTATGGGTCCACCTAAGCTGATGGCAGCAGGGATGAATCTTTATATGAATCAGCAGCAGCAGCAACTTCAACCCCAACAGCAGCAGCAACAGCAACAGCAGTTGCAAGCACAACAGCAAACACAGCAACTACAACAGCAACTTCAGCAACAATTACAGCAGCAACAAGAAACAAGTTCGCAATTGCAGGCAGTTGTTTCACCTCCACAGGTAAGCTCACCATCTACGATGGGAGTTCCATCACTGAATCAACAAACTCAGCAGCAAGCAAGCCCACAGCAAATGAGTCAACGAACTCCAATGAGCCCACAGCAGATGAGCTCAGGGGCACTTCATGCTTTGAGTGCTGGTAATCCAGAAGCTTGTCCAGCTAGTCCACAGTTGAGCTCACAGACGCTAGGGTCTGTCAGCAGTATAGCAAACTCACCTATGGACATGCAAGGTGTTAACAAGAGCAATTCTGTCAATAATGCACAATGA | 3921 | 0.4415 | MGVSFKVSKTGTRFRSKPLPAHPEPSSDGTSQNSMSISREPQSDLSVAGKNWGQMSTLSIPSEPLSLADAEASFTLNLFPDGYSIGKPFENEIANHAKYQDFPKLLHPYDRSSESLFLAIESGHLPADILDDIPVKYVDGALICEVRDFRRCASENGAGVVSTDMSPVVNKVCLKMSLENIVKDIPSITDKSWTYGDLMEVESKILKAVQPKLHLDPTPKLDRLCESRAPTKLNLNLGTLRRKRLRHIPEFAVTSNNEIHGRKVCTEIMPESSNSRLGDSGMVASNAILQQTLENPATQNFNPQIAMALRPKTFIPDSSVPGFSMLSNQSRYQMASAAINQSGASPASQDAMISYADNTNSNASIHAKRDSQHGQTSPLSNLAKRMRHSSAGVDTMQQQPVSTHSEALQGSDMNWQNPLLPQQAMTRGIQYVSSGNQKFSQKVFEGVLNQDQGAVHLASGQHGIRLVAKEEQFEMDKLDGTEMNRSMQMETSNLDSQQLLLQQRLPQAFMRPNFPQTTWNAMGQHMEKEAKKEDQVVQKRKSIQSPRLSSGALPHSPLSSKSGELSNGSVGPSFGQSAMTAVAGASQKEKISMASVPAAVGTPPLTSNANDSAQRQHQAQLAAKRRSNSLPKTPAMNGVGSPASVGNGVPLNANSPAVGTPAMVDQGLQNMLERFSKIELVTTRLQLNLKKNKSDDYPIRKQNTYSPQHLSAFLANPNNNEGLIEETSSLSKSLIGGSMNVCKMRALSFCLPERVLQGNVVSLVPRLRIRMIMAEKPSDGTVAMHYGDIDEGDFLASEEHLPTLPNTHCADLLAKQFCSQMAREGYMKEDDRIQIMPNRVNFQAGSQSSVPPNNSVVEMQQYGDPTIGQSSNEFAKPASNSNASLNLPQNLVANPRMLPPGNPQALQMSQGLLSGVSMAPRPQQLEAQALQQQQQQLQQHTLIQQQNPQFQRSMILGTNQFPHLNAIGQNSNISLGNHMLSKSSPLQIQMLQQQQQQNQQPQMQRKMVGLGTTVGLGNMRNNIVGLGPMGNPMGMGVGRGIGGTGISAPMTSISSMGNMGQSPMNLNPASNISNAISQRLRSGSITPSQAEMLASKLRMTHNGSMLGSPQSSIAGISGSRQIHPGSAGLMLGQSLSRSMNTLPRAVGPMGPPKLMAAGMNLYMNQQQQQLQPQQQQQQQQQLQAQQQTQQLQQQLQQQLQQQQETSSQLQAVVSPPQVSSPSTMGVPSLNQQTQQQASPQQMSQRTPMSPQQMSSGALHALSAGNPEACPASPQLSSQTLGSVSSIANSPMDMQGVNKSNSVNNAQ | 1306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip09g01205 | 1306 | Pfam | PHL domain | 684 | 837 | IPR046467 | - | |
| Aip09g01205 | 1306 | PANTHER | TRANSCRIPTION FACTOR SPT20 HOMOLOG | 1 | 1144 | IPR021950 | GO:0000124|GO:0003712 | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 391 | 413 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 541 | 572 | - | - | |
| Aip09g01205 | 1306 | Coils | Coil | 1174 | 1212 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 386 | 413 | - | - | |
| Aip09g01205 | 1306 | PANTHER | TRANSCRIPTION FACTOR SPT20 HOMOLOG | 1 | 1144 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 527 | 572 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 602 | 648 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 1208 | 1259 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 25 | 46 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 602 | 635 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 1269 | 1306 | - | - | |
| Aip09g01205 | 1306 | MobiDBLite | consensus disorder prediction | 1208 | 1306 | - | - | |
| Aip09g01205 | 1306 | Pfam | Spt20 family | 70 | 223 | IPR046468 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip09g01205 | - | - | gmx:100810803 | 1582.77 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip09g01205 | 09 | 18559402 | 18569642 | Aip09g01205 | 09 | 18559402 | 18569642 | ECH |