Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01180 ATGTCGTTTCTCTTCAACAAGGGTCAAAAGATCAAGGGGACTGTGGTGTTGATGCCCAAGAATGTCTTGGACTTCAACACCATATCCTCCATCCCCAACGGCGGCGTTGCCGGGGCATTCGACGGCCTCCTCGGCACTGCCACTGACTTACTTGGCCATGCAGTTGATGATCTCACTGCCATCTTTAGCCGCCAAATTTCGCTTAAGTTGATCAGTGCTACCAAGACTGATGCAAACGGAAATGGGAAAATTGGAAAGGAAACTTATGTAGAGAATCATCTTCCAACCTTACCCACATTGGGAGCAAGGCAAGAAGCATTTGATATTCATTTTGATTATGATGCCGAGTTTGGAATTCCAGCAGCATTTTATCTCAGAAGCTACATGCAAACTGAGTTCTTCCTCGTTAGTGTTACTCTTGAAGACGTTCCAAACCATGGAACTATTCACTTTGTTTGCAACTCATGGGTCTACAACTTCAAAAATTACAAAAAGGACCGCATCTTCTTTATCAACAACtcaaaatttaaatttttATTACCTAGTGAAACACCTGCTTCACTATTGAAGTACAGAAAAGAAGAGTTGCAGAACTTAAGAGGAGATGGAACAGGGGAGCGCAAAGAATACGATAGGATTTACGATTATGATGTCTACAATGATTTAGGTAATCCAGATCGTGGTGAAAAGTATTCTCGCCCAATCCTTGGAGGCTCTTCCACTCATCCCTACCCTCGAAGAGTTAGAACTGGTAGAAAACCAACCAAAAAAGATCCTAAAAGTGAGACTCCACCAACGGAGACTTATGTTCCAAGAGACGAAAATTTTGGTCACTTGAAATCATCTGACTTCCTCATATACGGAATCAAATCTTTGTCTCAAAACGTGTTGCCTCTTTTCGAATCGTTGATCTTCGATTTAGACTTCACACCGAATGAGTTTGATAGCTTCGACGAAGTACGAGAACTCTACGAAGGAGGAGTCAAACTGCCCACAGATATGCTCAGTAAAATTAGTCCCTTGCCGGCGCTCAAAGAAATATTTCGGACTGATGGCGAACAAACACTCAAATTCCCACCACCTCATGTAATCAGAGTTAGCAAATCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTTGCTGGTGTAAATCCTTGTGTGATTCGACGTCTTCAAGAGTTCCCACCCCAAAGCACACTAGATGCTACCATCTACGGTGACCAAAACAGTAAAGTTTCAAAACAAGAGATGGAGACTAACCTAGATGGGCTCACAGTGGAACAGGCACTTAATGGTAATAGATTATTCATATTGGATTACCATGATGCCTTCATGCCATATCTAGAAAGGATCAACAAAATTGCAAAGGCTTATGCTACTAGAACATTCCTTTTCTTGAGTGACAATGCGAAATTGAAGCCAGTTGCCATTGAGTTAAGTTTGCCACATCCTAGTGGAGATCAATATGGTGCTGTTAGTAAAGTCATCTTGCCTGCTTCTGAAGGTGTTGAAAGCACAATTTGGCTATTGGCCAAGGCTCATGTAATTGTCAACGACTCGTGTTATCATCAACTCATGAGCCACTGGTTAAACACACACGCAGTTATTGAGCCATTTGCCATAGCAACAAATAGGAATCTTAGTGTGCTTCACCCCATTAGTAAACTCCTACACCCTCATTATCGTGACACCATCAACATCAATGGACTTGCTCGTCAAGCACTAATCAATGCAGGTGGCATCATAGAGCAATCATTTTTGCCTGGCCCCAATTCCATAGAGATGTCTTCAGCTGTTTACAAGAATTGGGTATTCACAGACCAAGCTTTACCAGCTGATCTTGTTAAGAGGGGATTGGCAATTCAAGATCCTTCTTCACCTTATGGCCTTAACCTAGTGATAAAGGATTACCCTTATGCAGTTGATGGACTAGAGATATGGGATGCAATTAAGACATGGGTCCAAGACTATGTTTCCTTGTACTACCCTTCAGATGAAGCAGTTAAGAAAGATTCAGAACTGCAGGCATGGTGGAAGGAAGCTGTAGAGAGGGGTCATGAAGACTTAAAAGACAAGCCATGGTGGCCAAAAATGCAAAGCATTCAAGAATTGATTCAATGCTGCTCTATCATTATATGGACCGCTTCGGCGCTTCATGCGGCCGTTAATTTCGGACAGTATCCATATGGAGGTTACATCCTTAACCGTCCAACTCTAAGTAGAAGATTGATCCCAGAGAAGGGAACTAAAGACTATGATGAGATGGTGAAAAATCCTCAAAAGGCTTATTTGGGAACAATCACACCTAAGTATCAGACCCTTGTTGATCTCTCAGTGATTGAGATTTTGTCAAGGCATGCCTCTGATGAAGTGTACCTTGGGCAGAGGGATAATCCTAACTGGACAAGTGATTCAAGGGCAATACAAGCTTTCAACAAGTTTGGGAGCAAGTTGGCAGAGATTGAGGGTAAGATTCAAGAAAGGAACAAGGATTCCAGTTTGAGCAATAGGTTTGGACCTGTTGAAGTTCCCTATACTTTGCTTGTTCCTTCTAGCACTGAAGGCTTAACTTTCAGAGGTATCCCTAACAGTATCTCCATCTGA 2610 0.4218 MSFLFNKGQKIKGTVVLMPKNVLDFNTISSIPNGGVAGAFDGLLGTATDLLGHAVDDLTAIFSRQISLKLISATKTDANGNGKIGKETYVENHLPTLPTLGARQEAFDIHFDYDAEFGIPAAFYLRSYMQTEFFLVSVTLEDVPNHGTIHFVCNSWVYNFKNYKKDRIFFINNSKFKFLLPSETPASLLKYRKEELQNLRGDGTGERKEYDRIYDYDVYNDLGNPDRGEKYSRPILGGSSTHPYPRRVRTGRKPTKKDPKSETPPTETYVPRDENFGHLKSSDFLIYGIKSLSQNVLPLFESLIFDLDFTPNEFDSFDEVRELYEGGVKLPTDMLSKISPLPALKEIFRTDGEQTLKFPPPHVIRVSKSAWMTDEEFAREMLAGVNPCVIRRLQEFPPQSTLDATIYGDQNSKVSKQEMETNLDGLTVEQALNGNRLFILDYHDAFMPYLERINKIAKAYATRTFLFLSDNAKLKPVAIELSLPHPSGDQYGAVSKVILPASEGVESTIWLLAKAHVIVNDSCYHQLMSHWLNTHAVIEPFAIATNRNLSVLHPISKLLHPHYRDTININGLARQALINAGGIIEQSFLPGPNSIEMSSAVYKNWVFTDQALPADLVKRGLAIQDPSSPYGLNLVIKDYPYAVDGLEIWDAIKTWVQDYVSLYYPSDEAVKKDSELQAWWKEAVERGHEDLKDKPWWPKMQSIQELIQCCSIIIWTASALHAAVNFGQYPYGGYILNRPTLSRRLIPEKGTKDYDEMVKNPQKAYLGTITPKYQTLVDLSVIEILSRHASDEVYLGQRDNPNWTSDSRAIQAFNKFGSKLAEIEGKIQERNKDSSLSNRFGPVEVPYTLLVPSSTEGLTFRGIPNSISI 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01180 869 Pfam PLAT/LH2 domain 74 170 IPR001024 GO:0005515
Aip09g01180 869 MobiDBLite consensus disorder prediction 225 273 - -
Aip09g01180 869 SUPERFAMILY Lipoxigenase 180 869 IPR036226 -
Aip09g01180 869 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 8 174 IPR036392 GO:0005515
Aip09g01180 869 PRINTS Lipoxygenase signature 525 542 IPR013819 GO:0016702|GO:0046872
Aip09g01180 869 PRINTS Lipoxygenase signature 507 524 IPR013819 GO:0016702|GO:0046872
Aip09g01180 869 PRINTS Lipoxygenase signature 545 565 IPR013819 GO:0016702|GO:0046872
Aip09g01180 869 Pfam Lipoxygenase 188 852 IPR013819 GO:0016702|GO:0046872
Aip09g01180 869 PANTHER LIPOXYGENASE 2 869 IPR000907 GO:0016702|GO:0046872
Aip09g01180 869 PRINTS Plant lipoxygenase signature 171 192 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 395 414 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 243 262 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 460 484 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 141 159 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 311 332 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 782 796 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 356 372 IPR001246 GO:0016491
Aip09g01180 869 PRINTS Plant lipoxygenase signature 210 226 IPR001246 GO:0016491
Aip09g01180 869 Gene3D - 280 368 IPR027433 -
Aip09g01180 869 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 178 869 IPR013819 GO:0016702|GO:0046872
Aip09g01180 869 Gene3D - 369 502 - -
Aip09g01180 869 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 2 869 - -
Aip09g01180 869 Gene3D - 503 868 - -
Aip09g01180 869 SMART LH2_4 9 172 IPR001024 GO:0005515
Aip09g01180 869 ProSitePatterns Lipoxygenases iron-binding region signature 2. 552 562 IPR020834 GO:0016702|GO:0046872
Aip09g01180 869 Gene3D PLAT/LH2 domain 1 174 - -
Aip09g01180 869 ProSitePatterns Lipoxygenases iron-binding region signature 1. 525 539 IPR020833 GO:0016702|GO:0046872
Aip09g01180 869 CDD PLAT_LH2 10 172 IPR042057 -
Aip09g01180 869 ProSiteProfiles PLAT domain profile. 43 171 IPR001024 GO:0005515
Aip09g01180 869 Gene3D - 180 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01180 Aip-Chr9 17836632 17842799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01180 9 869 Acyl Lipid Metabolism Gene Families AT1G55020 56.636 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01180 K15718 - gmx:100781402 1363.21