Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01160 ATGTCTTCAGTTCGACGGAGAAGAGGATCGGAAGCTCAGAGCAAAGAGATTCAAGCCGAAGAGAACAACAAAGAAGAAGAAGAAGAAAAAGAACACGGAGAAGATGACAATGATAAGAACAAGAAGAAGAAGAAGATGAAAGATGAGAAGAACAAGGAGAAACAAGAGAAGAAGAGGAAGTGGTCCTGCATCGATAGCTGTTGCTGGTTCGTAGGGTGCATTTGCACGGTGTGGTGGTTGATGCTGTTCTTGTACAAGCTGATGCCGGCTTCGCTGCCGCAGTATGTGACGGAAGCGATCACGGGGCCGTTGCCGGACCCGCCGGGGGTGAAGCTGAAGAAGGAGGGGCTCACGGCAAAGCATCCGGTGGTGTTCGTGCCCGGTATCGTCACCGGTGGGCTTGAGCTCTGGGAGGGACATCAGTGTGCTGAAGGACTCTTCAGGAAACGCTTGTGGGGTGGCACCTTTGGAGAAGTCTACAGGAGACCTTCATGCTGGGCGGAGCACATGTCGCTCGACAATGAAACAGGATTAGATCCACCTGGCATAAGAGTGAGGCCTGTCTCTGGACTTGTAGCTGCTGATTACTTTGCCCCTGGATATTTCGTTTGGGCAGTCCTAATTGCTAACTTGGCTCACATTGGTTATGAAGAGAAAAGCATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACTGAGGTGCGTGATCGAGCACTAAGTCGGATAAAAAGCAATATAGAACTTATGGTTGCTACTAATGGTGGGAACAAGGCAGTTATTCTTCCACATTCAATGGGTGTATTATACTTTCTTCATTTTATGAAGTGGGTGGAAGCACCGGCACCAATGGGTGGTGGGGGTGGATCAGATTGGTGTTCCAAATATATAAAGGCAGTTGTAAACATTGGTGGACCATTTTTAGGTGTTCCCAAGGCTATAGCAGGTCTTTTCTCAGCTGAAGCCAGGGATATTGCTGTTGCCAGGGCGCTTGCACCGGGGTTTTTAGATAATGATCTTTTTCGCCTTCAAACCTTGCAACATGTAATGAGGATGACTCGCACTTGGGACTCAACTATGTCAATGATACCAAGAGGCGGGGAAACTATATGGGGTGGTCTTGATTGGTCACCAGAGGAAGGCTATACCCCTAGCGAGAGAAAGCAAAACTCTAACAATACTCAGTTAACAGGCCAAGAAACAAATAAAACAAATGTTAACTATGGAAGAATGATATCATTTGGCAGAGATGTGGCAGAGGCACCTTCCACTGAGATTGAGATGACTGACTTTCGAGGTGCCATTAAGGGTCATAGCGTTGCAAATACCTCTTGTCGCGATGTGTGGACCGAATATCATGACATGGGAGTTGAGGGAGTAAGAGCTGTCGCTGAACATAAAGTTTACACAGCTAGCTCAATTATAGACCTGCTTCAATTTGTTGCTCCAAAAATGATGGCCCGTGGAAGTGCACATTTCTCTTATGGAATTGCTGACAACTTGGATGATCCTAAATATCAACACTACAAATATTGGTCAAACCCCTTGGAGACAAAACTACCAAATGCTCCAGACATGGAAATCTTCTCCATGTATGGAGTAGGCTTACCAACAGAAAGAGCCTATATTTACAAGTTATCTCCCTATGCTGAGTGCTACATTCCGTTTGAAATAGATACCACAGCAGAAGGTCCTGATGAAGCTAGCTGTCTGAAGGGTGGAGTCTATACTGTCGATGGTGATGAGACCGTGCCGGTTCTAAGCACGGGCTTCATGTGCGCGAAAGGTTGGCGCGGGAAAACCAGATTCAACCCTTTTGGGATTAAGACTTACATTAGAGAATATGAGCATTCTCCTCCAGCAAACTTTCTAGAAGGCAGGGGGACACAAAGTGGTGCCCATGTTGATATAATGGGAAATTTTGCATTGATTGAGGATGTTATAAGGGTGGCGGCAGGGGCCAAAGGAGAAGATCTGCAAGGCGATCAAGTGTATTCCGACATCTTTAAATGGTCTGAGAAAATTAAGTTACGCCTGTGA 2046 0.4614 MSSVRRRRGSEAQSKEIQAEENNKEEEEEKEHGEDDNDKNKKKKKMKDEKNKEKQEKKRKWSCIDSCCWFVGCICTVWWLMLFLYKLMPASLPQYVTEAITGPLPDPPGVKLKKEGLTAKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYRRPSCWAEHMSLDNETGLDPPGIRVRPVSGLVAADYFAPGYFVWAVLIANLAHIGYEEKSMYMAAYDWRISFQNTEVRDRALSRIKSNIELMVATNGGNKAVILPHSMGVLYFLHFMKWVEAPAPMGGGGGSDWCSKYIKAVVNIGGPFLGVPKAIAGLFSAEARDIAVARALAPGFLDNDLFRLQTLQHVMRMTRTWDSTMSMIPRGGETIWGGLDWSPEEGYTPSERKQNSNNTQLTGQETNKTNVNYGRMISFGRDVAEAPSTEIEMTDFRGAIKGHSVANTSCRDVWTEYHDMGVEGVRAVAEHKVYTASSIIDLLQFVAPKMMARGSAHFSYGIADNLDDPKYQHYKYWSNPLETKLPNAPDMEIFSMYGVGLPTERAYIYKLSPYAECYIPFEIDTTAEGPDEASCLKGGVYTVDGDETVPVLSTGFMCAKGWRGKTRFNPFGIKTYIREYEHSPPANFLEGRGTQSGAHVDIMGNFALIEDVIRVAAGAKGEDLQGDQVYSDIFKWSEKIKLRL 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01160 681 MobiDBLite consensus disorder prediction 1 52 - -
Aip09g01160 681 Pfam Lecithin:cholesterol acyltransferase 480 641 IPR003386 GO:0006629|GO:0008374
Aip09g01160 681 Pfam Lecithin:cholesterol acyltransferase 147 422 IPR003386 GO:0006629|GO:0008374
Aip09g01160 681 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 28 681 - -
Aip09g01160 681 MobiDBLite consensus disorder prediction 377 402 - -
Aip09g01160 681 MobiDBLite consensus disorder prediction 34 52 - -
Aip09g01160 681 Gene3D alpha/beta hydrolase 162 335 IPR029058 -
Aip09g01160 681 Coils Coil 7 60 - -
Aip09g01160 681 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 28 681 - -
Aip09g01160 681 MobiDBLite consensus disorder prediction 385 402 - -
Aip09g01160 681 SUPERFAMILY alpha/beta-Hydrolases 119 601 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01160 Aip-Chr9 17371671 17377986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01160 163 681 Acyl Lipid Metabolism Gene Families AT5G13640 77.586 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01160 K00679 - gmx:100800857 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01160 09 17371671 17377986 Aip09g01160 09 17371671 17377986 ECH