Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip09g01054 | ATGTATGCTGATCGGGTGGACAGTGGAGTCAGGAGATCCGCCAAGGAACGCCTTAACGGAAACACCGTCACTGATTCTTCGCGGCCGCAACGGCAAATCACCGGCAAGAGGCAAAGGCAAGATGACAAGTGGGAACATGATCTCTTTGATGATGATGATGGATCCCGGATCACTAATCGCAAAGTTACTTCTCATGATCTTCGTCTTAAGCTTCAAAAGAAAGGTCTTCAACCGGCAACTCAGAGTGGAAGGAGTTCTGCTCCAAATGTGCGGGATCTTCGTGAAAGGCTATCAGGGACAATGACTGTGCAACCTAAAAACATTGATCCACCAAAGTCAAAGGTGGTAGCCAAACCAAGCAGTAAAAGTGTCGGTGTTGAGGCTCCTGCAGTACAGGCCAAGAGACCATCTAATTCAGTCCCTAAAAGGTTGCCACAGAAGGCTGATATTTCGGTGGATGATTTCTTGCAATCATTGGGTCTCGAAAAGTATCTCATAACTTTTCAGGCAGAAGAAGTTGATATGGCAGCCCTTAATCATATGACTGATGAGGATCTCAAGGCTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCGCTAGAGTCAAAGGTCTAA | 624 | 0.4615 | MYADRVDSGVRRSAKERLNGNTVTDSSRPQRQITGKRQRQDDKWEHDLFDDDDGSRITNRKVTSHDLRLKLQKKGLQPATQSGRSSAPNVRDLRERLSGTMTVQPKNIDPPKSKVVAKPSSKSVGVEAPAVQAKRPSNSVPKRLPQKADISVDDFLQSLGLEKYLITFQAEEVDMAALNHMTDEDLKAMGIPMGPRKKILLALESKV | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip09g01054 | 207 | MobiDBLite | consensus disorder prediction | 32 | 58 | - | - | |
| Aip09g01054 | 207 | CDD | SAM_superfamily | 151 | 204 | - | - | |
| Aip09g01054 | 207 | SMART | SAM_4 | 144 | 207 | IPR001660 | GO:0005515 | |
| Aip09g01054 | 207 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
| Aip09g01054 | 207 | MobiDBLite | consensus disorder prediction | 99 | 144 | - | - | |
| Aip09g01054 | 207 | ProSiteProfiles | SAM domain profile. | 151 | 207 | IPR001660 | GO:0005515 | |
| Aip09g01054 | 207 | SUPERFAMILY | SAM/Pointed domain | 151 | 204 | IPR013761 | - | |
| Aip09g01054 | 207 | MobiDBLite | consensus disorder prediction | 15 | 31 | - | - | |
| Aip09g01054 | 207 | Gene3D | - | 150 | 207 | IPR013761 | - | |
| Aip09g01054 | 207 | PANTHER | OSJNBA0060P14.15 PROTEIN | 126 | 194 | - | - | |
| Aip09g01054 | 207 | PANTHER | OSJNBA0060P14.15 PROTEIN | 1 | 109 | - | - | |
| Aip09g01054 | 207 | Pfam | SAM domain (Sterile alpha motif) | 149 | 204 | IPR001660 | GO:0005515 | |
| Aip09g01054 | 207 | PANTHER | PA-PL1 PHOSPHOLIPASE FAMILY | 126 | 194 | - | - | |
| Aip09g01054 | 207 | PANTHER | PA-PL1 PHOSPHOLIPASE FAMILY | 1 | 109 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip09g01054 | Aip-Chr9 | 14931729 | 14936282 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip09g01054 | 38 | 206 | Glycosyltransferase | AT3G07170 | 61.176 | 8.76e-62 | 189 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip09g01054 | - | - | gmx:100784706 | 293.508 |