Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01023 ATGGGGAAAAAGAGGGGATCCGAAATGAACATTTTATTTGGATGGTTGATGAAGTTATCTATCAAAGTTAAAATCTTTTTGGGAACATTGGTTGTGCTTTGTGCTTTGGTGGCTCTAGGTTTTACCATCAAAGATCATGAATATTTCTTCATAGTCGCTGAAGCTGTTCATCTTGCTGGGACTATTGTCCTCTTATACAAGCTCTTCACCAAGAAAACTTGCTCTGGTTTATCACTTAAAACCCAAGAGATCACAGCTTTGTACCTATCAGGAAGATTAATTTGTGGCATGTTGTTGAGAAATGTTGTTGGCATCTACATGTACATTATGCTAGACTTGGTATTTCTCTTGTCAACATTACTCACAATATGGAAGATAAGGTTCAAATTGAAGTCCTCCTATATTAAAGAGCTTGACACTGTACGAGTGCCTTTTATGGTGGTGAGTTGTGCAATCCTTGCTATAATAATCCACCCGCGTTCAAGTGATTTTTCTTTCACCAACACCCTTTGGGCATTCTGTGTGTACTTGGAAGCCATTTCAGTTTTTCCTCAACTTCGTTTCATGCAAAATGCAAAGATGGTAGAAACATTTACAGGATATTATGTGTTTTCGCTTGCCTTTCTAGCAGAAATGGTACAATCGTTTATCTTGGCTGATTTTTGTTACTATTACATAAAAAGCTTCAAACAAGGCCAACTTTTGAGGAAAATGCCAATTTAA 723 0.3707 MGKKRGSEMNILFGWLMKLSIKVKIFLGTLVVLCALVALGFTIKDHEYFFIVAEAVHLAGTIVLLYKLFTKKTCSGLSLKTQEITALYLSGRLICGMLLRNVVGIYMYIMLDLVFLLSTLLTIWKIRFKLKSSYIKELDTVRVPFMVVSCAILAIIIHPRSSDFSFTNTLWAFCVYLEAISVFPQLRFMQNAKMVETFTGYYVFSLAFLAEMVQSFILADFCYYYIKSFKQGQLLRKMPI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01023 240 Pfam ER lumen protein retaining receptor 73 208 IPR000133 GO:0006621|GO:0016021|GO:0046923
Aip09g01023 240 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 207 - -
Aip09g01023 240 PRINTS ER lumen protein retaining receptor signature 193 207 IPR000133 GO:0006621|GO:0016021|GO:0046923
Aip09g01023 240 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016021|GO:0046923
Aip09g01023 240 PRINTS ER lumen protein retaining receptor signature 171 191 IPR000133 GO:0006621|GO:0016021|GO:0046923
Aip09g01023 240 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016021|GO:0046923
Aip09g01023 240 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 207 IPR000133 GO:0006621|GO:0016021|GO:0046923
Aip09g01023 240 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 207 239 - -
Aip09g01023 240 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 207 239 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01023 Aip-Chr9 14533506 14537117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01023 1 240 Miscellaneous Gene Families AT3G25160 48.188 2.09e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01023 - K10949 gmx:100790210 284.263