Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01002 ATGGCTCTGAACTTGCCCTCTCCAGCGCAAGTGAAGCCCTTCTTTTTCGCTTCTGATTCCCCAAAGCTTCCAGGAAGCTTTTCTTTGAAGAGAAAAGAAAATGAGACAACAGTAGAAAGAAGAATATGTTGCTCAGTGCAATCACCAGCACCAGCATGGCCAGGAACTGCTATTCCTGATCCTAATGCTAAAGTATGGGATGGACCAAAACCAATTTCTATCTTAGGATCTACAGGTTCAATTGGAACCCAGACACTGAATATAGTGGCTGAGTTTCCGGATAGATTTAAAGTGGTGGGGCTTGCAGCTGGTTCAAATGTTACTCTTCTTGCTGATCAGATAAAAACATTTAAGCCTGAACTTGTTGCTCTTAGAAATGAGTCTCTAATTGGTGAACTCAAAGAGGCTATTGCTGATTCCGATCACAAACCTGAAATCGTCGCCGGAGAACAAGGAGTCATTGAGGTTGCTCGCCACCCTGATGCAGCCACTGTAGTTACAGGAATAGTTGGTTGCGCAGGATTAAAGCCAACTGTTGCTGCCATAGAAGCAGGGAAAGACATAGCATTGGCCAACAAAGAGACAATGATTGCTGGAGGCGCCTTTGTTCTTCCTCTTGCTCACAAACATAACATCAAAATTCTTCCAGCTGATTCAGAACATTCTGCCATCTTTCAGTGTATCCAGGGGTTGCCAAAGGGTGCACTTAGGAAAGTAATTTTGACTGGATCTGGAGGTGCTTTCAGGGAATGGCCAAAGGAAAAGATGAAAGAAATTAAACTTGCTGATGCACTAAAGCATCCTATCTGGAGTTTGGGAAGAAAGATAACTATTGACTCAGCTACCCTTTTCAATAAGGGTCTGGAGGTAATTGAAGCACATTATTTGTTTGGAGCTGAATATGATGATATTGAGATTGTTATTCATCCACAATCTATCATACATGGAATGATTGAAACTCAGGACTCATCTGTTATTTCACAGTTGGGGTTACCAGATATGCGTTTGCCTCTCCTCTACACATTGTCATGGCCAGAAAGAGTCCCTTGTTCTGAAGTAACTTGGCCCCGTCTTGATCTTAGCAAGTATGGTTCCCTAACATTTCAAGCACCAGACACTGATAAGTTCCCATCTGTGAATCTTTGCTATGCTGCTGGACGTGCCGGAGGAACAATGACTGGAGTTCTCAGTGCAGCAAATGAGAAAGCTGTTGAATTATTTGTTGAAGAAAAGATTACCTATCTGGATATTTTCAAGGTTGTGGAGTTAACATGCGAAGCGCATCAGAAAGAATTGGTGCCGTCTCCTTCACTTGAGGAAATCCTTCACTATGACCAGTGGGCGCGACAATATGCTGCTGGTCTGCAAATAGCTTCAAGTATTTGA 1386 0.4293 MALNLPSPAQVKPFFFASDSPKLPGSFSLKRKENETTVERRICCSVQSPAPAWPGTAIPDPNAKVWDGPKPISILGSTGSIGTQTLNIVAEFPDRFKVVGLAAGSNVTLLADQIKTFKPELVALRNESLIGELKEAIADSDHKPEIVAGEQGVIEVARHPDAATVVTGIVGCAGLKPTVAAIEAGKDIALANKETMIAGGAFVLPLAHKHNIKILPADSEHSAIFQCIQGLPKGALRKVILTGSGGAFREWPKEKMKEIKLADALKHPIWSLGRKITIDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHGMIETQDSSVISQLGLPDMRLPLLYTLSWPERVPCSEVTWPRLDLSKYGSLTFQAPDTDKFPSVNLCYAAGRAGGTMTGVLSAANEKAVELFVEEKITYLDIFKVVELTCEAHQKELVPSPSLEEILHYDQWARQYAAGLQIASSI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01002 461 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 461 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip09g01002 461 Pfam DXP reductoisomerase C-terminal domain 329 450 IPR026877 -
Aip09g01002 461 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase 72 200 IPR013512 GO:0070402
Aip09g01002 461 Gene3D - 374 457 - -
Aip09g01002 461 TIGRFAM Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 70 452 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip09g01002 461 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 194 332 - -
Aip09g01002 461 SUPERFAMILY 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain 362 454 IPR036169 -
Aip09g01002 461 Gene3D - 64 218 - -
Aip09g01002 461 PIRSF Dxp_reductoisomrs 69 460 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip09g01002 461 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 218 IPR036291 -
Aip09g01002 461 Pfam 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain 214 297 IPR013644 GO:0005515
Aip09g01002 461 Hamap 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 72 455 IPR003821 GO:0008299|GO:0030604|GO:0046872
Aip09g01002 461 PANTHER 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01002 Aip-Chr9 14126355 14134551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01002 K00099 - gmx:100805316 807.749