Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00982 ATGGCTACTATCATTACAGTTTCTCTATTAATTATCTCCCTTTCATTCTTCTCCATATCCAGTGCAAAAATCTCAGGTCAACCTGGAATCAACTACGGTCAATTGGGCAACAATCTTCCACCTCCAAAAACCTCAATAAACCTAATCAAATCCCTAAAAGCCAAACGCGTCAAAATCTATGATACGAATCCATTGATCCTAAAATCCCTAGAAAACACGAACCTCCAAGTCTCAATCATGGTGCCAAACGAACTCGTCTCAAAAATCTCAACAAACCAAACACTCTCAGACCAATGGGTCCAATCCAACGTCGCACCCTTCTACCACAAAACCCTAATCCGATACCTCCTCGTCGGAAACGAACTCATCAGCTCCACGTCACCTGACACGTGGCACCACATCGTTCCCGCGATGCAGAGGATCAAAACCTCCCTAACAACGTTCCGTTTGCACAAGGTGAAGGTTGGAACGCCCTGTGCCATGGACGTGCTGGAATCGTCGTTTCCACCTTCAAATGGCACATTCAGAAACGACATTGCGTTTCGCGTCATGAAGCCTATGCTGAAATTTTTATCCAAAACCAAATCGTTTTTCTTCTTGGATGTGTACCCGTTTTTCGCGTGGTCCTCGGACCCTAAAAACATTGACCTTAATTACGCGCTATTTGAGTCCAAGAACATAACGGTAACGGACTCGGGTACGGGTTTGGTTTACCATAATTTGTTTGATCAGATGGTGGACGCGGTTTATTTTGCAATGAACCGGATCGGGTATCCGGATATTCGGATCTTTATTGCTGAAACGGGTTGGCCCAACGGAGGAAACTTGGACCAAATTGGAGCGAATGTTCACAATGCTGCTACGTATAACCGGAATTTTGTGAAGAAAGTGACGAAAAAACCGACGGTTGGGACTCCGGCTCGACCGGGTTGGAGTCTTCCATCGTTTATATTTGCGTTGTTTAACGAGAATTTAAAACCAGGATTAGGCACAGAACGTCATTTTGGGTTATTGTATCCGAATGGATCTGGAATTTACGAAATTGACCTTTCTGGAAAGACGCCGGAGTCAGAATTTCCAGCGCTGCCGCCGGCGGAGGATTACAAAGGGAAGGCGTGGTGTGTGGTGGCGGAGGGAGCGAACGTGACCTTAGTAGCGGCGGCGCTATCATACGCTTGCTCCCAAGGGAACGGAACCTGTGATCCGATCCAACGTGGACAATTATGTTTTGAACCGAACAGTGTAGTTGGGCATGCTAACTATGCGTTTAGTTCTTATTGGGCACAGTTCAGGTCTATTGGTGGAACTTGTTATTTCAACGGTTTAGCTGAAGCTACCTCAAAGGATCCAAGTTATGGATCTTGCAAGTTTCCAAGTGTGATTCTTTGA 1389 0.4579 MATIITVSLLIISLSFFSISSAKISGQPGINYGQLGNNLPPPKTSINLIKSLKAKRVKIYDTNPLILKSLENTNLQVSIMVPNELVSKISTNQTLSDQWVQSNVAPFYHKTLIRYLLVGNELISSTSPDTWHHIVPAMQRIKTSLTTFRLHKVKVGTPCAMDVLESSFPPSNGTFRNDIAFRVMKPMLKFLSKTKSFFFLDVYPFFAWSSDPKNIDLNYALFESKNITVTDSGTGLVYHNLFDQMVDAVYFAMNRIGYPDIRIFIAETGWPNGGNLDQIGANVHNAATYNRNFVKKVTKKPTVGTPARPGWSLPSFIFALFNENLKPGLGTERHFGLLYPNGSGIYEIDLSGKTPESEFPALPPAEDYKGKAWCVVAEGANVTLVAAALSYACSQGNGTCDPIQRGQLCFEPNSVVGHANYAFSSYWAQFRSIGGTCYFNGLAEATSKDPSYGSCKFPSVIL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00982 462 SMART X8_cls 372 457 IPR012946 -
Aip09g00982 462 SUPERFAMILY (Trans)glycosidases 29 349 IPR017853 -
Aip09g00982 462 Pfam X8 domain 373 443 IPR012946 -
Aip09g00982 462 Pfam Glycosyl hydrolases family 17 29 349 IPR000490 GO:0004553|GO:0005975
Aip09g00982 462 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 454 IPR044965 GO:0004553|GO:0005975
Aip09g00982 462 Gene3D - 368 459 - -
Aip09g00982 462 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Aip09g00982 462 Gene3D Glycosidases 28 357 - -
Aip09g00982 462 PANTHER BNAC03G35190D PROTEIN 18 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00982 Aip-Chr9 13737686 13740728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00982 24 462 Glycoside Hydrolase AT3G23770 54.831 8.11e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00982 - - ccaj:109805358 707.212