Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00972 ATGTCTCGGGCACCAAACTATGAGTTTCAGGAATGGTGGAATAAGCAGAGAGAAAAGAACAACGTAGACCTTTTCCAAGACAAGGAGCACCAAACGGAATCAGCTCCTTTTCTTTCCGTCGACATCCAGGGCGGCGGCGATGTCAAGGGTGGTGGTGGAGGCGGCGGACGCGGCGGAAAAGCTCGTTCCTCCGATCCATTGGTGGAGAAGGACCGGGCACGGAGCGCACGCCAGCTGTCATGGGTTGTGAGGCTGAAATTCCAGCAGGTTGGCGCGTTTCTTGCGTGGATATCGAACGGCGCCGTCCATCTCGTCCGGACAGCCAACCGGCGGATCTCCTCGGCCGGATCGCGGTCCGATTCCTCGTCGCGGCTCTACCGGGCGATCAGGGCGTTCTTAATTGTGGTGATCCTCTTATTAGGGTTTGAATTGTTAGCATATTTTAAAGGATGGCATTTCAGCCCTCCGGTGGTTGGGTCCGCCGAGGTGCTGGGGATGGTGGGAGTTGTTTACGCCAGATGGCTCGAGATTCGGGCCGAGTACCTTGCCCCGCCACTGCAGGGTTTGGCCAATGTGTGCACATTTTTGTTCATTGTGCAGACAGTTGATAGGATTGTGTTGATCTTGGGGTGTTTTTGGATCAAGTTCCGGCGGCTCAAGCCGGTGGCTTCGATTGAGTATGCCAGCATTGGAGAGAATAGGGAGGTGAATGTGGAAGAATATCCTATGGTGTTGATTCAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAGCAATCCATTGGAGCGGTTTGTATCATGGATTGGCCAAAAGAGAGAATGCTTGTACAGGTTCTTGATGATTCCGATGATGTAGACATCCAACAACTCATCAAGGCAGAAGTGCATAAATGGCAACAGAGGGGTGTTCGGATAATATATAGACATCGTCTCATACGTACAGGTTACAAGGCAGGGAATCTTAAATCTGCAATGAGCTGTGATTATGTTAAGGATTATGAGTTTGTAGCGATATTTGATGCTGATTTTCAGCCAACTCCAGATTTCTTATTGAAGACGATACCTTATTTCGAGGGAAATGATGATTTGGCATTAGTCCAAGCAAGATGGGCGTTTGTAAACAAGGATGAGAACTTGCTTACAAGATTGCAGAACATAAATTTATCATTCCACTTTGAAGTTGAACAGCAGGTGAATGGCTGGTTCCTAAACTTCTTCGGTTTCAACGGAACCGCAGGTGTCTGGAGAATAAAGGCCCTAGAGGACAGTGGTGGCTGGTTGGAGCGAACAACTGTCGAGGACATGGATATTGCCGTTCGTGCTCATCTGCATGGATGGAAGTTTGTATTTATCAATGACGTTAAGTGCCTTTGCGAGCTTCCAGAGACCTATGAGGCATATAAGAAGCAGCAACACCGATGGCATTCTGGTCCAATGCAATTGTTTCGTCTATGCTTTTTTGACATTCTTCGTTCGAAGATTAGTTGGGTAAAGAAGGCCAATATGATATTTCTTTTCTTCCTTCTAAGGAAGCTCATTCTTCCATTTTATTCATTCACCCTCTTCTGCTTCATTCTTCCAATGACGATGTTCCTTCCCGAAGCTGAACTACCTGCCTTAGTTGTTTGTTACATTCCTGGCCTCATGTCTGTCCTAAGCATTCTTCCGGCTCCACGCTCATTTCCATTCATTGTACCATACCTTCTGTTTGAGAACACCATGTCAGTGACCAAATTCAATGCCATGGTATCCGGCTTATTTCGCTTTGGAAGTTCTTATGAGTGGGTAGTCACGAAAAAACTAGGAAGGTCATCAGAGACAGATTTGATCGCCTACGAGAAGGAATCTGAACCTCTAATGCAATCTGCCACTCTTCATAGATCATCCTCGGATTCGGGCATCGAAGAACTAAGCAAACTAGATTTGTCTAAGAAAAGTGGAAAGACGAAGAGAAATCTTCTGTTCAGGAAAGAACTTGCTCTCGCATTTATCTTGCTAACTGCTTCGGTTAGAAGCTTATTATCTGCACAAGGAATTCACTTCTACTTCCTATTATTTCAAGGTATAAGCTTCCTGGTTGTTGGTCTCGATTTGATCGGCGAGCAGGTTAGCTGA 2115 0.4657 MSRAPNYEFQEWWNKQREKNNVDLFQDKEHQTESAPFLSVDIQGGGDVKGGGGGGGRGGKARSSDPLVEKDRARSARQLSWVVRLKFQQVGAFLAWISNGAVHLVRTANRRISSAGSRSDSSSRLYRAIRAFLIVVILLLGFELLAYFKGWHFSPPVVGSAEVLGMVGVVYARWLEIRAEYLAPPLQGLANVCTFLFIVQTVDRIVLILGCFWIKFRRLKPVASIEYASIGENREVNVEEYPMVLIQIPMCNEREVYQQSIGAVCIMDWPKERMLVQVLDDSDDVDIQQLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPTPDFLLKTIPYFEGNDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGWFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFVFINDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFFDILRSKISWVKKANMIFLFFLLRKLILPFYSFTLFCFILPMTMFLPEAELPALVVCYIPGLMSVLSILPAPRSFPFIVPYLLFENTMSVTKFNAMVSGLFRFGSSYEWVVTKKLGRSSETDLIAYEKESEPLMQSATLHRSSSDSGIEELSKLDLSKKSGKTKRNLLFRKELALAFILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00972 704 Pfam Glycosyl transferase family group 2 336 530 IPR001173 -
Aip09g00972 704 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 66 703 - -
Aip09g00972 704 PANTHER - 66 703 - -
Aip09g00972 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 244 526 IPR029044 -
Aip09g00972 704 MobiDBLite consensus disorder prediction 23 69 - -
Aip09g00972 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 459 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00972 Aip-Chr9 13525692 13532458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00972 1 704 Miscellaneous Gene Families AT3G07330 73.050 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00972 - - gmx:100801779 1101.66