Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00943 ATGCCGATCTTCTCGAACCACGTGCGCCTTTCGTCGTCGCTCCTCCAACGGCTCAAGAGGCACGTGACTGCCGGGGTGCACCGATCTTTCACCACCACGGAAGGGAACCGCCCTACCATCGTCCACAAGCGCAGCCTCGACATTCTCCACGATCCTTGGTTCAACAAAGGAACAGCTTTTTCTATGACAGAGCGTGATCGTCTTGATCTACGAGGACTGCTTCCTCCAAATGTTATGTCTCCCAATCTACAGATTGAACGATTCATGGTTGATCTGAAGAGACTTCAAGTTCAAGCAAGAGATGGACCTTCTGATCCTAATGCATTGGCCAAATGGCGGATACTCAACCGATTGCATGATAGAAATGAGACTATGTACTATAAGGTTTTGATTGCAAACATTGAGGAATATGCACCAGTAGTGTACACTCCAACAGTTGGGCTTGTATGTCAGAACTATAGTGGATTGTTTAGAAGGCCAAGAGGAATGTACTTTAGTGCTGAGGATCGCGGAGAAATGATGTCTATGGTCTATAACTGGCCCGCTGAGCAGGTTGATATGATTGTTGTTACTGATGGGAGCAGAGTTCTGGGACTTGGAGATCTTGGAGTTCATGGCATTGGCATTGCCATTGGGAAGCTTGATCTGTATGTTGCAGCTGCTGGGATAAATCCTCAAAGGGTTCTTCCTGTCATGATTGATGTTGGTACTAACAATGGGAAGTTACTCAAAGATCCCTTGTATTTGGGATTGCAGCAACACCGCCTTGATGGGGATGACTATGTTGCTGTTGTGGATGAATTCATGGAGGCTGTCTTTACTCGCTGGCCAAATGTGATTGTGCAGTTTGAAGATTTTCAAAGCAAGTGGGCATTTAAGTTATTACAGCGGTACAGAAATACCTACAGAATGTTCAATGATGATGTGCAGGGAACTGCTGGTGTTGCAATTGCTGGACTTCTAGGTGCTGTAAGAGCACAAGGGAGGCCAATGATTGACTTCCCAAAGCAGAAGATTGTTGTTGCTGGTGCTGGAAGTGCTGGAATTGGGGTTCTCAATGCTGCAAGAAAAACAATGGCAAGGATGTTGGGGAATAATGAGATTGCTTATGAGAGTGCAAAGAGTCAATTTTGGGTCGTTGACGCAAAGGGGTTAATCACTGAAGGACGGGAAAATATTGATCCAGATGCCCTACCTTTTGCAAGAAATTTGAAAGAAATGGATCGTCAAGGACTCAGGGAAGGAGCAAGCCTTGTGGAAGTGGTCAAGCAAGTGAAGCCTGATGTCCTTCTGGGATTATCTGCTGTTGGAGGATTATTCTCAAAAGAGGTATTAGAGGCCCTCAAGGATTCAACATCAACAAGACCAGCTATATTTGCCATGTCAAATCCAACAAAGAATGCTGAATGCACCCCTGAAGTAGCATTCTCCATATTGGGTGACAACATTATTTTTGCAAGTGGAAGTCCGTTCAGGGATGTGGATCTTGGAAATGGTCGCATTGGCCACTGCAACCAGGGAAACAACATGTACCTCTTTCCAGGCATTGGTCTTGGAACACTCTTGTCTGGTTCTAGAGTCATCTCCGATGGTATGCTACAGGCTGCTGCTGAGCGTTTGGCAGCATATATGAGTGATGACGAGGTCATCCAAGGGATTATTTTCCCCTCAATATCCAGAATTCGAGATATCACGCAAGAGGTAGCTGCTGCTGTTATTAAGGAAGCTGTGGAGGAGGATCTAGCTGAAGGACACAATGGCATGGATGCTCGAGAGCTCCGCAAACTCAGTCAGAATGAAATTGTGGAATATGTGAAGAAGAACATGTGGAATCCAGAGTACCCGACACTAGTTTACAAGCAAGATTGA 1869 0.4564 MPIFSNHVRLSSSLLQRLKRHVTAGVHRSFTTTEGNRPTIVHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNVMSPNLQIERFMVDLKRLQVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPVVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRVLGLGDLGVHGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNGKLLKDPLYLGLQQHRLDGDDYVAVVDEFMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRNTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEIAYESAKSQFWVVDAKGLITEGRENIDPDALPFARNLKEMDRQGLREGASLVEVVKQVKPDVLLGLSAVGGLFSKEVLEALKDSTSTRPAIFAMSNPTKNAECTPEVAFSILGDNIIFASGSPFRDVDLGNGRIGHCNQGNNMYLFPGIGLGTLLSGSRVISDGMLQAAAERLAAYMSDDEVIQGIIFPSISRIRDITQEVAAAVIKEAVEEDLAEGHNGMDARELRKLSQNEIVEYVKKNMWNPEYPTLVYKQD 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00943 622 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 21 308 IPR046346 -
Aip09g00943 622 CDD NAD_bind_1_malic_enz 309 612 - -
Aip09g00943 622 PIRSF ME 13 620 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 Gene3D - 307 622 - -
Aip09g00943 622 SMART Malic_M_2 309 577 IPR012302 GO:0051287
Aip09g00943 622 Pfam Malic enzyme, NAD binding domain 309 577 IPR012302 GO:0051287
Aip09g00943 622 Gene3D - 43 306 IPR037062 GO:0004471
Aip09g00943 622 SMART malic_2 119 299 IPR012301 GO:0004471
Aip09g00943 622 Pfam Malic enzyme, N-terminal domain 119 299 IPR012301 GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 125 149 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 185 214 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 221 243 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 280 298 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 305 321 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 339 355 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 PRINTS Malic enzyme signature 453 469 IPR001891 GO:0004470|GO:0004471
Aip09g00943 622 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 309 619 IPR036291 -
Aip09g00943 622 ProSitePatterns Malic enzymes signature. 305 321 IPR015884 GO:0004471
Aip09g00943 622 PANTHER MALIC ENZYME 32 618 - -
Aip09g00943 622 PANTHER MALIC ENZYME-RELATED 32 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00943 Aip-Chr9 12535103 12548196 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00943 K00028 - gmx:100799344 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00943 09 12535103 12548196 Aip09g00943 09 12535103 12548196 ECH