Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00874 ATGTCGCAACAACAACAGCAGAACAGCAACATACCAGTGAGCGAGGTTTTCTGGACTCTCGCTGATAAAGCCGACAAGAAGTTCTCCAACATCAGAGACTTGCCTTATTACCAGCGCTCTAGGCATGATACATACTTTTATAAGGTGTTCAAGGTGTACACACAATTGTGGAAGTTTCAACAGGAGAACCGGCAGAAGCTGGTAGAAGCAGGGCTAAAAAGATGGGAGATTGGTGACATTGCATCTCGCATTGGACAGCTATATTTTGGGCAGTATATGCGCACAAGTGAGGCGAATTATCTATCAGAGTCATACATATTCTATGAAGCCATATTGACGAGGGAGTATTTTAAGGAGGGGCTGTTTCAAGATGTGAATATTGCAAACAAACAATTGAGGTTTCTTGCACGGTTCCTGATGGTGTGTTTGGTCTTAAACCGAAGGGAAATGGTGCAGCAATTGGTTAATCAGCTTAAAGTATTAGTAGATGAATGCAAGAGGACATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGCTTCAAGAAATAGTCAAATTTTTAAAAGCTGACACAGCTTTTATCAATATCAGACCCTTGAGATACAGTCTAGTTTTGGACCCTCATCCAGATACTTTACCACATGTTGCTGCAGCTATCACAAAACGAAGTTTAAAATTAAGAGATGCTGTCTTAAGTAGTTTCCATCCAAATGAGGTTAAGTTTTCAGATATTACTCTCGACACTTTTCGGATGCTTCAATGCCTGGAGTGGGAACCTAGTGGCTCATTTTACCAGTCTACTGGTTCAAAACTTGGTCAGAATGGAGCCACTGGGGCTAGTCGTATTAGTTACTCCCAAGAAATTGCTGATCCTACCTTACCTGCAAATCCACGGAAAGCTGTGTTATACCGTCCATCATTAACCCATTTTGTAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTATACTTGTCGGCTTCAGGATCTTGCACTGCTGCAAAGAATGAATCTGGTTGTATACCCCTTGGTCCTCGCGGAGATGGAGGACCAAACTGTGTATACCCATCTGACTTTCTACCATTTACAAGAAGACCACTTCTTCTGGTCATCGATAATGATAACAGCAAAGCATTTAAGGTTATATCCGGAGCCGAAAAGGGAGAATCGATTGCTATGCTCCTTTCTCCAAGCTGTTCACCTTCAATTGCATCTGATTCTTCCTCTCATATTTCAAATGGTAGTATATTCACCATGTTTCTTACCGCTCCCCTGCAAGCTTTCTGTCTGCTGCTAGGATTTTCAGGCACTGATATTGATTTGGACAAATATAACAATGCTGAAATGCTGCTCTCATCTTCATTAAACAACTGGGGAGCTGTGTTGGCGACCACGGACACACTCAATCCTGTATGGGGACAGGTTTTAGGTGATCCCTTTATAAGGAGAATTCTTTTAAGATTCATGTTTTGTGAAGCAGTATTGACCTTGTACACTCCAGCTCAAGACAAAAGTGAGTTCCTTCCGACATGTGTCCCTTCTCTTCCAACGCCTGTCCTGCCACCAAATTATTCCTATCAGAATGTAATTCTGCAACTCGCCGGAATTTTCGGTGCAACTAAGTATTTCGTCTTCTCAGAGGATGATCTTGCTGACAAAACACAAACAAACCTGGAGTTGTAG 1704 0.4219 MSQQQQQNSNIPVSEVFWTLADKADKKFSNIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLKRWEIGDIASRIGQLYFGQYMRTSEANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFLMVCLVLNRREMVQQLVNQLKVLVDECKRTFQESDFKEWKLVLQEIVKFLKADTAFINIRPLRYSLVLDPHPDTLPHVAAAITKRSLKLRDAVLSSFHPNEVKFSDITLDTFRMLQCLEWEPSGSFYQSTGSKLGQNGATGASRISYSQEIADPTLPANPRKAVLYRPSLTHFVAVLATICEELPSDGILLVYLSASGSCTAAKNESGCIPLGPRGDGGPNCVYPSDFLPFTRRPLLLVIDNDNSKAFKVISGAEKGESIAMLLSPSCSPSIASDSSSHISNGSIFTMFLTAPLQAFCLLLGFSGTDIDLDKYNNAEMLLSSSLNNWGAVLATTDTLNPVWGQVLGDPFIRRILLRFMFCEAVLTLYTPAQDKSEFLPTCVPSLPTPVLPPNYSYQNVILQLAGIFGATKYFVFSEDDLADKTQTNLEL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00874 567 Pfam Protein SCAI 344 506 IPR022709 GO:0003714|GO:0006351
Aip09g00874 567 Pfam Protein SCAI 20 343 IPR022709 GO:0003714|GO:0006351
Aip09g00874 567 PANTHER PROTEIN SCAI 3 341 - -
Aip09g00874 567 PANTHER PROTEIN SCAI 341 562 - -
Aip09g00874 567 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 3 341 - -
Aip09g00874 567 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 341 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00874 Aip-Chr9 11535330 11542369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00874 - - gmx:100810202 958.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00874 09 11535330 11542369 Aip09g00874 09 11535330 11542369 ECH