Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00844 ATGGCGGTGCCGGCGAGTTTCGAAGAgaaggattttctatcatgctgcggaagcaccacattcgccaAACACATGGCTTTCGCCTCTCCCTTCTCATCACTGGACCACGCAATTTCTGTTGCCAGAGACGTTTGGTTCAACACCGTTGATGTTAACGGTTGGCTTCAAGCTTTCTCTGCTCACCCTCAGATCGGTCAACAACACGCTCCCTCTCATGCCTCTCAAACCAGTGCTCAGTGGAGTAAAGGAGAACAATCAACTGCTCTTGCAACTGCTACTGGTTCTAGCTTACAGGAACTATCTGAATGGAATGTTCGGTACTGGGAAAAGTTTGGGTTTGTATTTCTCATATGTGCATCCGGGAGGAGCACTGATGAGATACTTGCTGAACTGAAGAGACGTTATACAAACAGGCCAATTGTTGAATTCGAGATTGCAGCTGAGGAGCAAATGAAAATTACAGAACTACGCCTTGCAAAGCTCTTTTCAAGTAAAGAAAGCATCCCGTCCACAACTGATAAAGATTCTACCATGTTTGCCAAAAAGGCAGAAGAAGATCGTATAAGCATTATTGGTGGGCATGTGACTGCAGCTTCGGAGAGTCCAGTAGGAAAATCAATCCAAGCTCCGGCTAGAACCCGCCCGCCCATTACCACTCACGTGTTGGACACTTCGCGAGGTGGTCCAGCTGCTGGTATTGATGTACTCTTAGAGGTGTGGAGAGGTGCTCAATCTCGCCCAGAATTTGGCACCTCAGACAATGGCGGTTGGGTGTTTCAAGGGTCATCGAAGACGGACTCAGATGGCCGCAGCGGTCAACTGATGAGCATAGTTGACAATGTTACTCCTGGGATATACAGGATAAGTTTCAACACAGGAAAGTATAATCCAAGAGGCTTCTTTCCATATGTATCCATTGTGTTTGAGATCCAAGAGTCACAGAAGAGGGAACATTTTCATGTTCCTTTATTGCTTTCCCCGTTTTCATTCAGCACTTACCGTGGAAGCTAG 1011 0.4491 MAVPASFEEKDFLSCCGSTTFAKHMAFASPFSSLDHAISVARDVWFNTVDVNGWLQAFSAHPQIGQQHAPSHASQTSAQWSKGEQSTALATATGSSLQELSEWNVRYWEKFGFVFLICASGRSTDEILAELKRRYTNRPIVEFEIAAEEQMKITELRLAKLFSSKESIPSTTDKDSTMFAKKAEEDRISIIGGHVTAASESPVGKSIQAPARTRPPITTHVLDTSRGGPAAGIDVLLEVWRGAQSRPEFGTSDNGGWVFQGSSKTDSDGRSGQLMSIVDNVTPGIYRISFNTGKYNPRGFFPYVSIVFEIQESQKREHFHVPLLLSPFSFSTYRGS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00844 336 Gene3D Transthyretin/hydroxyisourate hydrolase domain 206 334 IPR036817 -
Aip09g00844 336 PRINTS Transthyretin signature 216 236 IPR000895 -
Aip09g00844 336 PRINTS Transthyretin signature 314 336 IPR000895 -
Aip09g00844 336 TIGRFAM hdxy_isourate: hydroxyisourate hydrolase 216 336 IPR014306 GO:0006144|GO:0033971
Aip09g00844 336 ProSitePatterns Transthyretin signature 2. 319 331 IPR023419 -
Aip09g00844 336 PANTHER URICASE AND TRANSTHYRETIN-RELATED 6 336 IPR023416 -
Aip09g00844 336 PANTHER 5-HYDROXYISOURATE HYDROLASE 6 336 - -
Aip09g00844 336 MobiDBLite consensus disorder prediction 247 271 - -
Aip09g00844 336 ProSitePatterns Transthyretin signature 1. 220 235 IPR023418 -
Aip09g00844 336 SUPERFAMILY Transthyretin (synonym: prealbumin) 211 336 IPR036817 -
Aip09g00844 336 Gene3D - 8 165 IPR036778 -
Aip09g00844 336 Pfam OHCU decarboxylase 12 159 IPR018020 -
Aip09g00844 336 SUPERFAMILY UraD-Like 13 163 IPR036778 -
Aip09g00844 336 CDD TLP_HIUase 215 336 IPR014306 GO:0006144|GO:0033971
Aip09g00844 336 Pfam HIUase/Transthyretin family 217 335 IPR023416 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00844 Aip-Chr9 11025924 11029335 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00844 K13484 - gmx:100805930 561.607