Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00839 ATGGCTTCTTACACCAAACCCGACGACGATCAGGTTTTGGTAGAGCAAAAGTCGTCTACAAGGGTTATCATACTGAACAGGACAAGACAATTGAATGCCCTCTCTTTTTATATGGTATCTCGGCTACTGGAAATTTTTTTAGAAGATGAGGGAAATCCTGATATTAAGTTGGTTATCATGAAGGGAAATGGCAGAGCATTCTGTGCTGGTGGTGATGTTTCAGCTGTTGTTCGTGATGTGAAAGGAGGTGACTGGAGGTTGGGTGCAAAATTTTTTGAGAATGAATTTAAACTGAATTACTTGATGGCAACATATAGTAAGCCACAGGTTTCAATTCTTAATGGAATTGTCATGGGAGGTGGTGCTGGTGCTTCTATACATGGTAGATTTCGTGTAGCTACCGAGAAAACAGTTTTTGCAATGCCAGAAACAGAGTTGGGTCTATTTCCAGATGTAGGTTCCTCATATTTCTTGTCTAGACTGCCTGGATTTTTCGGAGAATATGTTGGTCTCATAGGTGCTAGGTTGGATGGCGCAGAAATGCTTACTTGTGGTCTTGCAACACATTTTGTCCCTTCATCAAAATTGCCATTACTGGAAGAATCATTGTACAAGGTAGAAAGCAATGACGCAACTGCAGTGTCTGCAATAATTGATAAGTACTCAGAGCAACCTTCCCTGAAAGAGGACAGTGTTTACCACAGGATGGATGCCATCAATAGGTGTTTCTCTAGAAAAACAGTTGAAGAAATATTATATTATCTTGAGATGGAAGCTATGAATAATAAGGCTGATAATTGGGCTTCTGCCACTATTCAAACCTTGAAGAAAGCTTCTCCAACAAGCCTGAAAGTATTTCTTAAATTGATTAGAAAAGCCAGACTCCAAGGTGTTGGTCAATGCCTTGTTACCGACTATAGAGTTGTATGTCATGTTCTGCAAGGACGCTACAGCAAAGATTTCTTTGAGGGTTGCAGAGCTATACTAATAGATAAAGACAGAAAGCCAAAGTGGGAGCCTTCAAGATTGGAGCTTGTAAGTGATAGTGATGTTGACTGTTACTTCTCGAAGCTTGACGACGAAGGATGGAAGGATTTGGAGCTTCCCGAGAGGCTCAACAATTTGCCTCCATATGTTATTTCAAAGCTTTAA 1152 0.4045 MASYTKPDDDQVLVEQKSSTRVIILNRTRQLNALSFYMVSRLLEIFLEDEGNPDIKLVIMKGNGRAFCAGGDVSAVVRDVKGGDWRLGAKFFENEFKLNYLMATYSKPQVSILNGIVMGGGAGASIHGRFRVATEKTVFAMPETELGLFPDVGSSYFLSRLPGFFGEYVGLIGARLDGAEMLTCGLATHFVPSSKLPLLEESLYKVESNDATAVSAIIDKYSEQPSLKEDSVYHRMDAINRCFSRKTVEEILYYLEMEAMNNKADNWASATIQTLKKASPTSLKVFLKLIRKARLQGVGQCLVTDYRVVCHVLQGRYSKDFFEGCRAILIDKDRKPKWEPSRLELVSDSDVDCYFSKLDDEGWKDLELPERLNNLPPYVISKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00839 383 Pfam Enoyl-CoA hydratase/isomerase 21 355 IPR045004 -
Aip09g00839 383 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 383 IPR032259 GO:0003860
Aip09g00839 383 CDD crotonase-like 12 196 - -
Aip09g00839 383 Gene3D - 6 373 - -
Aip09g00839 383 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 8 383 - -
Aip09g00839 383 SUPERFAMILY ClpP/crotonase 8 341 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00839 Aip-Chr9 10922095 10930960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00839 11 383 Miscellaneous Gene Families AT5G65940 67.560 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00839 K05605 - gmx:100170729 599.742