Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00829 ATGGCGGAGTTTCTTGATCTGGAATCCCAGGATGGCGTCCGGATGCCCTGGAACGTCATCCCCGGCACAAAGCAAGAAGCCGCCAACGCCGTCGTCCCCGTCGCCGTAATCTACACTCCCATCAAACACTTCCCCTCATCCGCCGCCCCTCTCCTCCCATACCAGCCCCAGCGCTGCCGCACCTGCCGCTCCGTTCTCAACCCCTTCTGCATCGTCGATTTCGCCGCCAAGATCTGGATCTGCCCCTTCTGCTTCCAGCGCAACCACTTCCCCCCTCACTACGCTTCAATCTCCGACGACAATCTCCCTGCTGAGCTTTTTCCACAGTACACAACAATAGAGTACGCGTCCACACCTGATCCTACCGCCACCGTCCCGCCGGTGTTCCTCTTCGTCGTCGACACGTGCGTCATCGAGGAGGAGATTGGATACCTACGCTCCGCCCTGCTTCAGGCGGTGGAGCTTTTGCCGGAGAATTCGCTTGTGGGATTGATCACGTTTGGGACCTTCGTGCATGTTCATGAGTTAGGGTTCGCTCAGGTTCCTAAGACTTATGTTTTTAAAGGATCTAAGGATGTTTCGAAGGATCAGTTGCTTGAGCAGATGTGCTTCTTTGCCAATAAGCCGAAGCCGGCCGTCGGCGTCATTGCCGGCGCCCGGGATGGCCTGTCCAGGGAGAGCATTTCGCGGTTCTTGGTGCCTGCTTCGGAGTGCGAGTTCACCCTGAATTCGGTTTTGGAGGAGCTGCAGAAGGATCCTTGGCCGGTGCCTGCTGACCAGCGTGCGACGAGGTGCACCAGTACTGCACTGAGCATAGCAGCCAGTTTGTTGGGGGCATGCGTTCCTGGCTCGGCCGCAAGAATTATGGCTTTCATTGGTGGGCCAGCAACTGAAGGACCTGCTCCTATTGTGTCCAAACAACTTACTGAACCGATTCGTTCCCACAAGGATTTGGATAAAGATTCTGTGCCACATTACCATAAATGTGTGAAATTTTATGATGGACTTGCAAAGCAGCTTGTACATCAAGGTCATGTGCTAGATCTCTTTGCTTGTGCTCTTGATCAGGTTGGCATTGCTGAGCTTAAAACTGCTGTTGAGAGGACTGGTGGCCTTGTTGTACTTGCTGAAAGTTTTGGTCATTCAGTTTTCAAGGATTCACTTAAGCGTATTTTCCAAGCCTCTAATTATGATCTTGGTCTATCATCAAATGGAATATTTGAGATAAACTGCTCTAAGGACTTGAAAGTTCAAGGTATTATTGGCCCTTGTGCAACTCTTGAAAAGAAAACCCCATTGTGTTCAGATACTGTTATTGGTCAAGGAGGTACTAGTGCATGGAAGATGTGTGGCCTTGACAAATCCACATCGTTGTGTCTGTTTTTTGATGTCGTGAGAAAGGAAACTCCTGATGCTACAGTGCAGTCTACAAGCAATCAATTTTACTTCCAATTCCTGACTTATTATCAGAGTAACAGCGGGGAAATGAGACTTCGAGTTACAACTCTTTCACGTAGATGGGTTGCTGGACCAGGAAGTTCACAGGCAAGCTTTCATCTCCTACCCTTTGATGCATTTTATCTGGACTTGATAGCTGGATTTGACCAAGAAGCAGCGGCTATAGTCATGGCACGCCAAGTCTCTTTCAAAATGGAAACAGAGGCTGAATTTGATCCCATCAGATGGTTGGATAAGGCATTGATAAACTTGTGTTCCCGGTTTGGAGAATATCAGAAGGACAGTCCAACTTCTTTTAGTTTGTCTCCCAGGTTGTCAATATTCCCACAATTTATGTTCCACTTACGACGTTCTCAATTTGTTCAGGTCTTCAATAATAGTCCAGATGAGACTGCATACTTTAGAATGATATTGAACCGCGAAAATGTTGCCAATTCTGTTGTCATGGTTCAGCCTTCGTTGATTACCTATTCATTCCATTCAGGTCCTGAACCAGCTCTTCTTGATGTGGCAGCCATTGCTGCTGACAGGATCCTGCTTTTGGATTCATTTTTCACTGTTGTTATTTTTCATGGTTCGACCATTGCTCAATGGCGCAAGGCTGGATATCATAATGAACCAGAACATCAGGCATTTGCTCAGTTACTACGAGCTCCTCATGATGATGCAGAGTCGATAATAAAGGAAAGATTTCCCGTACCTCGCCTAGTTGTTTGCGATCAGCATGGTTCCCAGGCGCGATTTTTACTAGCAAAGTTAAATCCTTCCGCTACTTATAACTCCGACGCTGCTCTTCCTGGAGGAGATATTATCTTTACAGATGATGTTAGCTTCGAGAAAATGGGAGGAGGGAAAGAAGAAAAGGAGGATATCATTGAAGTAATTACCGCTATTTACAAAGTTAATTTGCATTGCCCTAAATGTGGGAGCAATATCAAGAAGCATCTCCTTACTATTGAAGGAGTGCACAGTGTTGAAATAGATACTGAGAAAGGGGAGATCAAAGCAAAAGGAAAATTAGATCCTTTGAAAATATTGAAGATTATAGAGAAGAAAAGCAAGAGAAAAGTTGAATTAATATCACCAAAGATCAAGCCCAAGGAGAATATTCCCACGGATTCAAAGCCAAAGGAAAAGAAAGAACCAATTGTACGGACAATTACGGTGAAGACGCACATGCATTGTGACAAATGTGAAGCTGATCTCAGAACCACGTTGCTGAAGCATAAAGGTATTTTCAATGTTAAAATAGACAAGAAAGTTCACACTGTTACAGTTGAAGGCACAATTGAAGAAGAGAAGTTGATATCATTCATGAAAAAAAAGGTGCACAAAAATGCAGAGGTTATTTCCATAAAGGAATTGAAAAAGGTGGAGAAAAAAGAAGTCAAAGAAGAAGGAGGAAAATCTAGTGAATCATCAAAGAAGAAAGATGGTGAAACAACAAAGGAAAAAGATGAGACTAAGACAAAAGACAGTGTTCCTTATTTCATTCACTATGTTTATGCTCCTCAACTTTTCAGTGATGAGAATCCAAATTCTTGTTCTATTTTCTAG 3015 0.4484 MAEFLDLESQDGVRMPWNVIPGTKQEAANAVVPVAVIYTPIKHFPSSAAPLLPYQPQRCRTCRSVLNPFCIVDFAAKIWICPFCFQRNHFPPHYASISDDNLPAELFPQYTTIEYASTPDPTATVPPVFLFVVDTCVIEEEIGYLRSALLQAVELLPENSLVGLITFGTFVHVHELGFAQVPKTYVFKGSKDVSKDQLLEQMCFFANKPKPAVGVIAGARDGLSRESISRFLVPASECEFTLNSVLEELQKDPWPVPADQRATRCTSTALSIAASLLGACVPGSAARIMAFIGGPATEGPAPIVSKQLTEPIRSHKDLDKDSVPHYHKCVKFYDGLAKQLVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHSVFKDSLKRIFQASNYDLGLSSNGIFEINCSKDLKVQGIIGPCATLEKKTPLCSDTVIGQGGTSAWKMCGLDKSTSLCLFFDVVRKETPDATVQSTSNQFYFQFLTYYQSNSGEMRLRVTTLSRRWVAGPGSSQASFHLLPFDAFYLDLIAGFDQEAAAIVMARQVSFKMETEAEFDPIRWLDKALINLCSRFGEYQKDSPTSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVANSVVMVQPSLITYSFHSGPEPALLDVAAIAADRILLLDSFFTVVIFHGSTIAQWRKAGYHNEPEHQAFAQLLRAPHDDAESIIKERFPVPRLVVCDQHGSQARFLLAKLNPSATYNSDAALPGGDIIFTDDVSFEKMGGGKEEKEDIIEVITAIYKVNLHCPKCGSNIKKHLLTIEGVHSVEIDTEKGEIKAKGKLDPLKILKIIEKKSKRKVELISPKIKPKENIPTDSKPKEKKEPIVRTITVKTHMHCDKCEADLRTTLLKHKGIFNVKIDKKVHTVTVEGTIEEEKLISFMKKKVHKNAEVISIKELKKVEKKEVKEEGGKSSESSKKKDGETTKEKDETKTKDSVPYFIHYVYAPQLFSDENPNSCSIF 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00829 1004 SUPERFAMILY HMA, heavy metal-associated domain 782 839 IPR036163 GO:0046872
Aip09g00829 1004 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 765 IPR037364 -
Aip09g00829 1004 SUPERFAMILY vWA-like 125 393 IPR036465 -
Aip09g00829 1004 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 638 766 IPR036180 -
Aip09g00829 1004 Gene3D - 53 112 - -
Aip09g00829 1004 Pfam Sec23/Sec24 beta-sandwich domain 404 508 IPR012990 -
Aip09g00829 1004 Gene3D - 8 505 - -
Aip09g00829 1004 Gene3D - 871 941 - -
Aip09g00829 1004 Pfam Sec23/Sec24 trunk domain 125 392 IPR006896 GO:0006886|GO:0006888|GO:0030127
Aip09g00829 1004 Pfam Sec23/Sec24 helical domain 535 633 IPR006900 GO:0006886|GO:0006888|GO:0030127
Aip09g00829 1004 Pfam Gelsolin repeat 649 735 IPR007123 -
Aip09g00829 1004 Gene3D Severin 637 741 IPR029006 -
Aip09g00829 1004 CDD HMA 789 837 IPR006121 GO:0046872
Aip09g00829 1004 Pfam Sec23/Sec24 zinc finger 56 94 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Aip09g00829 1004 CDD Sec23_C 627 747 IPR037550 GO:0030127|GO:0090114
Aip09g00829 1004 Pfam Heavy-metal-associated domain 786 839 IPR006121 GO:0046872
Aip09g00829 1004 Pfam Heavy-metal-associated domain 879 928 IPR006121 GO:0046872
Aip09g00829 1004 Gene3D Sec23/Sec24 helical domain 532 766 - -
Aip09g00829 1004 SUPERFAMILY Helical domain of Sec23/24 535 637 IPR036175 GO:0006886|GO:0006888|GO:0030127
Aip09g00829 1004 Gene3D von Willebrand factor, type A domain 126 401 IPR036465 -
Aip09g00829 1004 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 765 - -
Aip09g00829 1004 Gene3D - 778 843 - -
Aip09g00829 1004 CDD HMA 872 930 IPR006121 GO:0046872
Aip09g00829 1004 MobiDBLite consensus disorder prediction 947 975 - -
Aip09g00829 1004 SUPERFAMILY beta-sandwich domain of Sec23/24 4 510 - -
Aip09g00829 1004 SUPERFAMILY HMA, heavy metal-associated domain 870 927 IPR036163 GO:0046872
Aip09g00829 1004 SUPERFAMILY Zn-finger domain of Sec23/24 49 118 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00829 Aip-Chr9 10744690 10760418 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00829 K14006 - gmx:100803793 1367.06