Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00823 ATGAATAATAATGAAATGGAAGGCCTAAAAAGGGTTTCTAGCATGAGGAGGTGCTCCAATGTTGTTAAAACCAAAATTGTCAACAACTTGAATCCAATTTGCCATGCTGGTCAACAATTGACACTCAAGGGCAAGTTCTTCATTACTCTCACTCAGGATCAAAGAAAATCAATACCTGGAAAATTTATTTCTGTTCAGATTTACAGTGGCACAGAAGTAGATCCAATAACAGGGAAAGGGAAGCTAAGTGAGAAGGCAGTTCTCAAACATGATGGGACAAAAAAACATGACAATGGGGATGCAAAAACCATGATATATAAAATTAGAATAAATGTTTATTCACATTTTGGAACACCAAGAGCTTTTTTGATACAGAACCGATACAAGAAGAGATTCTTCCTTCAATCTGCATCAATTGAAACTTGTAACAATCATATCATTCACTTTGATTGCAATTCTTGGGTGTATCCAATCAAGAAGACCAAATCCGATAGACTCTTCTTCTCAAATGCTTGCTATATTCCAAGCGAAACGCCAAGGGCACTAATGGAATTAAGAAAGGAAGAGCTTGAAAGATTGAGGGGTGAGAGAGATGTAAATAGTAGTGAAAGTGAAGAAAGGAAGGAATGGGGAAGAATATATGAATATGATTGCTATAATGACCTTAGTGACCCTGAGAAAGGTGCTGAATATCTTAGACCTATATTGGGTGCTTCTTGGTTATATCCATATCCTCGTAGACTAAGAACAGCTCGCAAGCCTAGTGCCTCAGGTCCAGCAAATGAGAGCCGGCCAAGGAATTTTGAGATATATGTTCCTTCAGATGAGAGATTTAGTCCAAATAAAATGAAGGAACTGAAATCAAATTCTATACATGCTCTTGCACATTTCTTGTCACCCAAGGCAGCAGAACCATTACTTCATCAACAATGTTCCAAAAGCTTTGAATCATTTGAAGATATTCTTGACTTGTTCTCTGCCTCTAGGAACCAAAGAATTGAAGGGTGGGTCAGAGATAACTTAAATAAAATGTTACCAATTCAGAACTTAGAGGAAATTATTCGTCTAATCAAGAATAAACCATTAGAACTTCCTATACCTGAAATACTATCTGAAAATGCATGGGTTTGGAAAGATGACATTGAGTTTGGAAGACAAATGCTGGCTGGAACCCACCCAATCAAAATCCAATGTTTGAAGACATTCCCAACTCAGAGTTCAATAAATCCATCATTCATAGAACAGAGGCTTGAAGGATGGACACTTCCTCAGGCACTGAAGCATGGAAGATTATTCATGCTTGATCACCATGAGTACCTGTATCCATTTCTGAACAGAATAAACTTAAATGGGGTATGTGCCTATGCATCAAGGACATTCCTATTCTTAAGGAGTGATGGCATGCTTAAGCCTATGGCTATAGAACTTAGCTTGCCAGGCTCATCTCTAAGCAAGGGAATCTGCAGAGTGTTTTTCCCAGCCAAACAGGGAATAGAAGCAGCTCTTTGGCAGCTTGCTAAGGCTCATGTTCAAGCTAACGACACAGTTTATCATCAACTTATTAGCCATTGGTTACACACCCATGCAGTTGTTGAACCATTTATCATTGCCACCAAAAGAAGGCTAAGTGTGATGCACCCAATTCATAGGTTATTGAATCCTCATTTCAAAGACACAATGCATATAAATGCCTTAGCAAGAATTATCCTTATAAATTCAGGAGGAGTTCTTGAGAGAACACTATCATCTGGTGAAATCTCCATGCAATTATCTTCTGAGCTCTATAAAGAGGGAATGGCCATAAAAGATGAAAACAGCCAAAGTGGGGTTCAACTTCTCTTGCAAGATTATCCCTATGCAACAGATGGGCTTGAAATTTGGGTAGCCATAAAGAAATGGGTGAAGGATTTCTGTTCATTCTATTACAAAGATGATGAGTCAATTAGGTCAGATGTTGAACTTCAATCTTGGTGGTCAGAGATCCGAACCATTGGACATGGTGACAAGCACAATGAGACATGGTGGTACCAAATTGACACAACCTCAAGTCTCGTTGAGTCACTAACAATCCTAATTTGGGTAGCTTCTGCCCAGCATGCCGCTATAAACTTTGGACAATATGCATACAATGGCTACCCTCCAAATAGGCCTACATTGTGTAAGAAATTTGTCCCAATGGAAGGTACAATCCAGTTTGGTGAGTTTTTGAAGGACCCAGACAAATACTTCCTAAAGATGTTGCCAAATAGGTTTGAGATGAGCCTTGTTGTAGCATTGTTTGATGTGCTCTCAAGGCACACCTCTGATGAGGTCTACTTGGGGTGCCAGCTGTCACCTGGTTGGATAGACAGTGAATCTATTCAAAATAGGTTTGCAGAGTTTAAGGAAGAATTGAAAGAGATTCAGGCAAGGATCTTGGAAAGAAATAGAGATCCTAAGCTTAAGAACAGGCGTGGACCAGCAAAGATTGATTACACTCTGTTATATCCTGACACCTCTAGTTCTTGGTCTAGAACAGGACTCACTTGCAGAGGGATTCCTAATAGCATTTCAATTTAA 2559 0.3923 MNNNEMEGLKRVSSMRRCSNVVKTKIVNNLNPICHAGQQLTLKGKFFITLTQDQRKSIPGKFISVQIYSGTEVDPITGKGKLSEKAVLKHDGTKKHDNGDAKTMIYKIRINVYSHFGTPRAFLIQNRYKKRFFLQSASIETCNNHIIHFDCNSWVYPIKKTKSDRLFFSNACYIPSETPRALMELRKEELERLRGERDVNSSESEERKEWGRIYEYDCYNDLSDPEKGAEYLRPILGASWLYPYPRRLRTARKPSASGPANESRPRNFEIYVPSDERFSPNKMKELKSNSIHALAHFLSPKAAEPLLHQQCSKSFESFEDILDLFSASRNQRIEGWVRDNLNKMLPIQNLEEIIRLIKNKPLELPIPEILSENAWVWKDDIEFGRQMLAGTHPIKIQCLKTFPTQSSINPSFIEQRLEGWTLPQALKHGRLFMLDHHEYLYPFLNRINLNGVCAYASRTFLFLRSDGMLKPMAIELSLPGSSLSKGICRVFFPAKQGIEAALWQLAKAHVQANDTVYHQLISHWLHTHAVVEPFIIATKRRLSVMHPIHRLLNPHFKDTMHINALARIILINSGGVLERTLSSGEISMQLSSELYKEGMAIKDENSQSGVQLLLQDYPYATDGLEIWVAIKKWVKDFCSFYYKDDESIRSDVELQSWWSEIRTIGHGDKHNETWWYQIDTTSSLVESLTILIWVASAQHAAINFGQYAYNGYPPNRPTLCKKFVPMEGTIQFGEFLKDPDKYFLKMLPNRFEMSLVVALFDVLSRHTSDEVYLGCQLSPGWIDSESIQNRFAEFKEELKEIQARILERNRDPKLKNRRGPAKIDYTLLYPDTSSSWSRTGLTCRGIPNSISI 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00823 852 SUPERFAMILY Lipoxigenase 174 852 IPR036226 -
Aip09g00823 852 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 172 852 IPR013819 GO:0016702|GO:0046872
Aip09g00823 852 Pfam Lipoxygenase 182 830 IPR013819 GO:0016702|GO:0046872
Aip09g00823 852 Gene3D - 282 374 IPR027433 -
Aip09g00823 852 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 51 173 IPR036392 GO:0005515
Aip09g00823 852 Gene3D - 174 280 - -
Aip09g00823 852 SMART LH2_4 42 170 IPR001024 GO:0005515
Aip09g00823 852 Coils Coil 784 811 - -
Aip09g00823 852 Gene3D PLAT/LH2 domain 7 173 - -
Aip09g00823 852 Gene3D - 376 495 - -
Aip09g00823 852 ProSitePatterns Lipoxygenases iron-binding region signature 2. 545 555 IPR020834 GO:0016702|GO:0046872
Aip09g00823 852 Gene3D - 496 851 - -
Aip09g00823 852 PRINTS Lipoxygenase signature 500 517 IPR013819 GO:0016702|GO:0046872
Aip09g00823 852 PRINTS Lipoxygenase signature 538 558 IPR013819 GO:0016702|GO:0046872
Aip09g00823 852 PRINTS Lipoxygenase signature 518 535 IPR013819 GO:0016702|GO:0046872
Aip09g00823 852 ProSiteProfiles PLAT domain profile. 44 169 IPR001024 GO:0005515
Aip09g00823 852 PANTHER LIPOXYGENASE 97 850 - -
Aip09g00823 852 PRINTS Plant lipoxygenase signature 312 333 IPR001246 GO:0016491
Aip09g00823 852 PRINTS Plant lipoxygenase signature 210 226 IPR001246 GO:0016491
Aip09g00823 852 PRINTS Plant lipoxygenase signature 243 262 IPR001246 GO:0016491
Aip09g00823 852 PRINTS Plant lipoxygenase signature 139 157 IPR001246 GO:0016491
Aip09g00823 852 PRINTS Plant lipoxygenase signature 760 774 IPR001246 GO:0016491
Aip09g00823 852 PRINTS Plant lipoxygenase signature 455 479 IPR001246 GO:0016491
Aip09g00823 852 PANTHER LIPOXYGENASE 97 850 IPR000907 GO:0016702|GO:0046872
Aip09g00823 852 ProSitePatterns Lipoxygenases iron-binding region signature 1. 518 532 IPR020833 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00823 Aip-Chr9 10688147 10697724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00823 53 852 Acyl Lipid Metabolism Gene Families AT3G22400 43.639 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00823 K00454 - gmx:100793997 1241.87