LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g00807	ATGAATCACTCCTCCGTAGACTTTGAGAAACCAATTGGTTACTACGCTGCTTCAGTTCAAGAGCTTATTGTTATTGATGATGTGCTTTCGGCTATGGTTGGGGTCGAAGGACGTTACATCTTAATCAGAACAGTTCGTGGAAAGACGGATGATGTTACTTTCCATGTTGACCCATCTATGGATTTGGCACTGCAGGAATTGGCAAAACGGATATTCCCTCTTTGTAGGAGCTTTTTGTTGATCAACCAGTTTGTGGAGTCAAGGTCTCAGTTCCAGAATGGCCTTGTTAATCATGCTTTCTCTGCTGCTCTGAGGGCTCTTCTTCTTGATTACCAAGCCATGGTAGCACAGCTCGAACACCAATTTCGGCTTGGTAGACTTTCCCTTCAAGGATTGTGGTTCTATTGTCAGCCCATGATGGGGTCAATGCAAGCATTATCCATTGTTATTCAGAAGGCTGCATCCAACAATTTTTCTGGATCTGCTGTTCTTAACTTACTGCAGAGCCAGGCAAAGGCTATGGCTGGAGACAATGCTGTCAGGTTATTGCTTGAGAAAATGACACAATGTGCGAGCAATGCCTACATGAGCATATTGGAAAGATGGGTCTATGAAGGAGTTATTGACGATCCATACGGAGAATTTTTCATTGCAGAGGACAAATCTTTTCAGAAGGAGAGCCTCACTCAAGATTATGATGCCAAGTATTGGGGACAGCGTTACAGCCTCAAAGATGGAATTCCTAGTTTTCTAGCAAATATTGCTCAGACAATTTTGACCACTGGAAAATATCTAAATGTCATGAGAGAATGTGGGCACAACGTTCAGGTCCCTCAATCAGAAAATTCAAAACTAATGAGCTCTGGTTCAAATCATCATTATCTTGAATGTATTAAGGCTGCCTATAACTTTGCTAGTCGTGAACTGTTGAATCTCATTAAGGAAAAGTATGATCTAATGGGAAAGCTGCGATCTATAAAGCACTACCTTCTTCTTGATCAGGGTGATTTCTTGGTACATTTTATGGATATTGCTCGAGACGAGCTAGCCAAAAAGCCTGATGAAGTCTCAGTTGAGAAGTTGCAGTCTCTTCTAGACCTTGCTTTGCGTACTACAGCAGCTGCAGCAGATCCTCTTCATGAAGGCGTAACCTGTGTTGAAAGGTCATCTTTGCTGAAAAGGTCGAGCACATTCAAAGATCTTGAACTTAGCCAGCGAAGTTCGGGTGACAATGACCTGGAGGAGCCAGTTAGCATCACTAGCCTTGAAACATTTTCACTTAGTTATAAGGTGCAATGGCCATTGTCTATAGTATTATCACGAAAAGCCCTTACAAGATACCAGTTAATTTTTCGATTTCTTTTCCATTGTAAACATGTTGAGCGTCAACTGTGTGGAGCATGGCAAGTACATCAAGGTGTTAAAGCTCTCAATACACGTGGAACTGCTCTCTCCAGATCATCCCTTCTTTGCCGTAGTATGCTTAAATTCATCAATAGCCTTTTACACTATCTGACATTTGAGGTTATTGAACCCAATTGGCATGTGATGCATGACAGACTTCAATCAGCAAATAGCATAGATGAGGTTATACAGCATCATGATTTTTTCCTCGATAAATGTTTGAGAGAATGTTTGCTTCTTTTACCTGAGCTGCTCAAGAAGGTGCAGAAACTTGAATCCATGTGCCTACAATATGCAGCAGCAACTCAGTGGCTTATATCATCTTCTATAGTATTACACAATCCAGACGAACCAACTGAATCCTCGACGAAAGCCAAGCAACGGAAATCTGGCCAGGTTCTAAAGTCAACCACCAGAAATGTGGCAGTCACCGAGTCCATTCTCAAATTTGAAAAGGAATTCAATGCTGAGCTACAGAGTCTTGGATCAATGTTGAGTAGTAGTTCCCAGGCAGAGCCATATTTGGCTCATCTTGCACAATTGATCCTTGGTGTTAAAAGCGAACAGAATGGTTTTTAA	1983	0.417	MNHSSVDFEKPIGYYAASVQELIVIDDVLSAMVGVEGRYILIRTVRGKTDDVTFHVDPSMDLALQELAKRIFPLCRSFLLINQFVESRSQFQNGLVNHAFSAALRALLLDYQAMVAQLEHQFRLGRLSLQGLWFYCQPMMGSMQALSIVIQKAASNNFSGSAVLNLLQSQAKAMAGDNAVRLLLEKMTQCASNAYMSILERWVYEGVIDDPYGEFFIAEDKSFQKESLTQDYDAKYWGQRYSLKDGIPSFLANIAQTILTTGKYLNVMRECGHNVQVPQSENSKLMSSGSNHHYLECIKAAYNFASRELLNLIKEKYDLMGKLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAADPLHEGVTCVERSSLLKRSSTFKDLELSQRSSGDNDLEEPVSITSLETFSLSYKVQWPLSIVLSRKALTRYQLIFRFLFHCKHVERQLCGAWQVHQGVKALNTRGTALSRSSLLCRSMLKFINSLLHYLTFEVIEPNWHVMHDRLQSANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVQKLESMCLQYAAATQWLISSSIVLHNPDEPTESSTKAKQRKSGQVLKSTTRNVAVTESILKFEKEFNAELQSLGSMLSSSSQAEPYLAHLAQLILGVKSEQNGF	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g00807	660	Pfam	Gamma tubulin complex component C-terminal	319	649	IPR040457	GO:0043015
	Aip09g00807	660	PANTHER	GAMMA TUBULIN COMPLEX PROTEIN	12	653	IPR007259	GO:0000226\|GO:0000922\|GO:0005815\|GO:0007020\|GO:0043015
	Aip09g00807	660	Gene3D	-	319	654	IPR042241	-
	Aip09g00807	660	PANTHER	GAMMA-TUBULIN COMPLEX COMPONENT	12	653	-	-
	Aip09g00807	660	Pfam	Gamma tubulin complex component N-terminal	25	316	IPR041470	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip09g00807	Aip-Chr9	10449853	10457507	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip09g00807	K16569		-	gmx:100795585	1086.25