Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00798 ATGGCTTCCACTGCTGTTGCCACCTCCTCCGTCCCTGCCGCCGTGAGGACGGAACCGCTGCCGCAGACGTCTGATTCTTCTCCTTCCAGAACCTCCGCCGCCGCCGAGGTGTCGCTTTTATCGTCCTCACCCGCCGCCGAGGTCATTGATCGTAGCGATTCTTCCAATTCATCGCCGAACCTATTTGCTGACGCTGAAAATCAGACTATGGACGCGTTGAAGAGTGAAGAGTATCGGCAGCTGTTTCGTCTTCCACCAGATGAAGTCCTTATTGAAGATTTTAATTGTGCCCTCCAGGAAAATATACTTATTCAGGGTCATATGTACCTTTTTGTCAACTTTATATGTTTCTACTCGAACATATTTGGGTTTGAGACAAAGAGAATAATTGCATTCCCAGAAGTCACAAGTGTACGTAGGGCAAAGACAGCTGGGCTCTTTCCCAATGCCATTGAGATTCTTGCTGGCAACAGGAAGTACTTTTTCGCATCTTTCCTATCCCGTGATGAAGCTTTTAAGATTATTAATGATGGATGGTTACGGCAGGCTAATGGTACCAGAGCAGTTATTGAACAGGAGTCTATGTCCGAGTGCAGCGCCCAAGACAGTGAACTTATAGCTACTGAAAATGTCAAAGGTTCTGATATATTAGACAATGAATCTCCTTCTGCAGACCCAAGCAAGGTTACTACTAATATTATCAACGACATGGGACCTCCATCAAATATTATAGATAGCCCTGTAGTGATGAAAGTTACAGATAAACAATCCAGTACAAAACAGGTAGCTGAACCTGTATTGAATGAAGATTCTCCAGCTGCGAGTTCATGCTGGAAAGAGGAGGACATTGATGCTCCAACAACCCCAGAAGAATACACATGTGTTGCAGAAGCTGAGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAACTTTCATGAGTCTTTCCATAAAAGATGTGGTGATAAAGACTTCAAGTGTAGTTCGTGGCGTCCTCAAGAGAAATTTGGGTATGCTCGTGAACTATCTTTTCAACATCCAATAAAACTTTATCTTGGAGCAAAATTTGGTGGCTGCCATGAGCTTCAGAAATTTCGAGTGTATAAGAGCAGTCATCTGGTTATAGAGACATCACAAGAAGTCAGTGATGTACCTTATGCAGATTATTTTCGTGTTGAGGGACTGTGGGATATACAGAGACACAAGGATGACTCTTGCATTTTGAGAGTATATGTGACTGTAGCATTTTCTAAGAAAACTATTTGGAGAGGCAAAATATTACAATCAACCGTTGAAGAATGTCGAGAAGCTTATACTACTTGGATTAGCATGGCACATGACTTGTTGAAGCAGAAAAACCTAGAAAAGCAAGAAAGAGGTGCTGTTGTTGCTTTGACTCAAAATGGAAAAATCAATCCTGATATAGAGTTGGAGACTGTAGAAACTTCAGGAGCTTCACAGGAGGAATGTAACTCTACAAGGATGCAAGCTACATCTAGTGTAGCAGATGCTATTCACAAGGTTGACACCCAGATGCAAACAAGATTCATTGATACATCGTCTGTTCCTTCTTTGTTCAAAGATTATGTGAGAAAGTTAAGGTTGTCTTTGAAAAGTCAGAACAACCTCTCATTACTCATTGTTGCCATTTTTGCGCTGATTTTCTTCATGCAGCAGTTTAGCATACTTGTGCTATTGTCAAGACCTCAACACATACATGTTAACCCTCCCGTAGACAACATAAATATGATGGAAAATGGAGTTACTAGAACTTCAGACGTGGCATGGTTGGAGAAAAGAATTCATCACCTCAAAGATGAGATGTACATGGTTGAGACTAGGCTTGAAAGGATGCGGTATGAACATGCACTCTTAAAAAAGCAACTAAATGATCTTGAGCGTAAATAA 1929 0.4147 MASTAVATSSVPAAVRTEPLPQTSDSSPSRTSAAAEVSLLSSSPAAEVIDRSDSSNSSPNLFADAENQTMDALKSEEYRQLFRLPPDEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIAFPEVTSVRRAKTAGLFPNAIEILAGNRKYFFASFLSRDEAFKIINDGWLRQANGTRAVIEQESMSECSAQDSELIATENVKGSDILDNESPSADPSKVTTNIINDMGPPSNIIDSPVVMKVTDKQSSTKQVAEPVLNEDSPAASSCWKEEDIDAPTTPEEYTCVAEAEFPIKVEDFFRYFFSDDAVNFHESFHKRCGDKDFKCSSWRPQEKFGYARELSFQHPIKLYLGAKFGGCHELQKFRVYKSSHLVIETSQEVSDVPYADYFRVEGLWDIQRHKDDSCILRVYVTVAFSKKTIWRGKILQSTVEECREAYTTWISMAHDLLKQKNLEKQERGAVVALTQNGKINPDIELETVETSGASQEECNSTRMQATSSVADAIHKVDTQMQTRFIDTSSVPSLFKDYVRKLRLSLKSQNNLSLLIVAIFALIFFMQQFSILVLLSRPQHIHVNPPVDNINMMENGVTRTSDVAWLEKRIHHLKDEMYMVETRLERMRYEHALLKKQLNDLERK 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00798 642 Coils Coil 622 642 - -
Aip09g00798 642 CDD PH-GRAM_GRAMDC 86 179 - -
Aip09g00798 642 SMART gram2001c 76 142 IPR004182 -
Aip09g00798 642 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 14 640 - -
Aip09g00798 642 Pfam VAD1 Analog of StAR-related lipid transfer domain 295 439 IPR031968 -
Aip09g00798 642 Pfam GRAM domain 78 179 IPR004182 -
Aip09g00798 642 ProSiteProfiles VASt domain profile. 291 460 IPR031968 -
Aip09g00798 642 MobiDBLite consensus disorder prediction 1 38 - -
Aip09g00798 642 Gene3D - 74 182 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00798 Aip-Chr9 10276507 10287309 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00798 - - adu:107464474 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00798 09 10276507 10287309 Aip09g00798 09 10276507 10287309 ECH