Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00794 ATGGCTATCTTGGCGTTGCCACTTGTCATCTCATTTCTCAGGCCCAGCCCCTCCCTCCTCCGCCGTGCACCACTCGCCGCCACACGCCTCCCCTCGATTCTCCTCCGCCGTCGCCAATTCGCCTCCCTCCCCGCCTCCGCCTCCACTCCTCCCACTTTCGTCTCCCCTCACTCTTCTTCGGCACAACCCAACACTCTCCCGCAAGCTCCCACCCTCACTTTCCAACAAGCCATTCAGCGCCTTCAGGACTATTGGGCTTCTGTGGGATGCTCCATTATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTCGGTCCAGAACCATGGAATGTTGCATATGTAGAGCCTAGCATCCGCCCCGATGATAGCCGATATGGAGAAAACCCAAATAGGCTCCAAAGACACACTCAGTTTCAGGTCATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTATCAGCTTTAGGTATTGATGTTACTGCTCATGATATACGATTTGTGGAGGACAATTGGGAGAGTCCGGTTCTTGGTGCTTGGGGTTTAGGCTGGGAAATCTGGATGGATGGGATGGAGATTACGCAATTCACCTACTTCCAGCAGGCAGGAAGTCTCCCGCTATCACCTGTTTCCGTAGAAATCACGTATGGCCTTGAGCGTATCATTATGTTACTACAGGGAGTTGATCATTTCAAGAAGATCAAATATTCCGATGGAATTACATATGGAGAGTTGTTCTTGGAGAATGAGAAAGAAATGAGTGCATATTACTTGGAGCATGCCAGTGTTGATCATGTTCAAAAACATTTTGATTTCTTTGAGGAGGAAGCTCGTAGATTACTTTCTTCAGGCTTAGCAATCCCTGCGTATGATCAGCTTCTAAAAACATCTCATGCTTTCAATATATTAGATTCCAGAGGCTTTGTTGGGGTGACAGAGCGTGCTCGATATTTTGGTCGAATGCGTAGTTTAGCTCGCCAGTGTGCACAACTTTGGTTGAAGACTAGGGAGAATCTTGGCTTCCCTCTTGGTTTCATCTCTGAACCTGATAATTTTGTATTGCCAAAAGAAGTTCTTGAGGCTGCTTGTGAGAAGGTGCATGATCAGTCAAGAGCATTTGTTCTTGAAATTGGAACAGAAGAGATGCCCCCTCAAGATGTTGTAGATGCAAGCAAGCAACTGAAAGATTTGATGCTGCAATTACTAGAGAAACAGAGGTTAAAGCATGGCAACATGCAAGTTTTTGGCACCCCACGCAGATTAGTGGTTGTCATTGAAAATCTTTCCACAAAACAAGCAGAAGTGGAGGTTGAGGTTCGAGGTCCTCCAGTTTCAAAATCGTTTGATCATGAAGGAAATCCAACAAAGGCCATTGAAGGATTTTCCCGTAGATACTCTGTTCCACTGGACTTGGTATACCGAAAGGTTGATGGAAAAACAGAATATGTTTATGCTCGTGTGAAGGAGCTTTCAAGATATTCTTTAGAGGTTCTGTCTGAAGATTTGCCTGCTACTATTTCTAAAATATCATTTCCAAAGACGATGAAATGGAATTCTCAGGTGATATTTAGTAGGCCTATCCGTTGGATTTTGGCTATGCATGGAGATGTAGTAGTCCCATTTATGTTTGCTGGGGTATTGAGTGGAAACTTATCTCGTGGTCTTCGCAATACTTCTTCAGCTATCCTCCAGGACCGCAAGAAAATGGTTGTTGAGCAATCTAATGCATTAGCAGAAAGTGTAAATGGCCAAATTGTTATTCCAACAGGCTTGCTTGATGAGGTTGTAAATCTTGTTGAGGCACCTATTCCCGTGCTTGGAAAGTTTAAAGAAACCTTCTTGGCCCTTCCAAAAGAACTTTTGACCATGGTTATGCAAAAGCATCAGAAATATTTTGCTGTATGTGATGATGAAGGACAGCTGTTGCCTTATTTTATTGCTGTTGCAAATGGAGCAATTGATGAGACTACTGTGAGGAAAGGAAATGAAGCTGTCCTCAGGGCTCGCTATGAAGATGCCAAGTTCTTTTATGAGATGGACACTCGTAAAAAATTCTCTGAATTCCGGAAGCAACTTAAAGATATTCTGTTTCATGAGAAGCTTGGAACCATGTTGGATAAGATGACTCGTATAGAAAACATGGTGATTATGCTAAGTTGCATCCTGAATATTAGTGAAGATAAACAACAAATCATCCGGGATGCTGCCTCGCTTGCTATGTCTGATCTTGCCACTGCTGTTGTCACTGAATTCACCTCACTTTCAGGAATAATGGGGCGTCACTATGCCATTAGAGATGGATATTCGGAGCAGATTGCAGATGCCTTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACATGCTACCTAAGAGTGATGCTGGCATAGTTTTGGCCATTGCTGATAGATTAGACAGCCTGGTAGGTTTGTTTTCTGCTGGATGTCAACCTAGTTCTACAAATGACCCATTTGGTCTGCGAAGAATCTCCTATGGTCTTGTACAATTGTTGGTGGAAAAGAACAAAAACCTTAACTTGAAAGAGGCTCTGCAACTTGCTGCAGATGCACAATCCATCAAAGTGGATCCGCATGTAATAGATGATGTACATCAGTTTGTTACTCGAAGATTAGAGCAGTTTCTGGTTGACAAGGGAGTGAGTGCAGAATTTGTTCGTTCTGTCCTTGCTGAGAGGGCAAAATTTCCCAGTCTAGCAGCAAAGTCAGCATATAAAATGGAAGAATTATCAAGAGATACACTTTTCCCTAAAGTGGTTGAAGCATACTCTCGACCAACAAGAATTGTCCGTGGGAAGGAAGGCGAACTTAATATGACGGTGGATGAGGCTGCTTTTGAGACAAATGAAGAGAGAGTTTTATGGAGCACATTTTTGTCAGTTAAAGAGAGCATTAATCCTGGTCTTGACATTGATGATTTTGTTGAGATTTCATCTCAGCTAATACAGCCGCTTGAGGATTTTTTCAACAATGTCTTTGTTATGGTGGATGATGATAAGATCAGAAAAAACAGGCTAGCTATGCTAAAAGAAATTTCTGAGCTTCCAAGAGGAATAGCAGACCTCACAGTTCTTCCAGGATTTTAA 3144 0.4326 MAILALPLVISFLRPSPSLLRRAPLAATRLPSILLRRRQFASLPASASTPPTFVSPHSSSAQPNTLPQAPTLTFQQAIQRLQDYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHVQKHFDFFEEEARRLLSSGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRENLGFPLGFISEPDNFVLPKEVLEAACEKVHDQSRAFVLEIGTEEMPPQDVVDASKQLKDLMLQLLEKQRLKHGNMQVFGTPRRLVVVIENLSTKQAEVEVEVRGPPVSKSFDHEGNPTKAIEGFSRRYSVPLDLVYRKVDGKTEYVYARVKELSRYSLEVLSEDLPATISKISFPKTMKWNSQVIFSRPIRWILAMHGDVVVPFMFAGVLSGNLSRGLRNTSSAILQDRKKMVVEQSNALAESVNGQIVIPTGLLDEVVNLVEAPIPVLGKFKETFLALPKELLTMVMQKHQKYFAVCDDEGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKKFSEFRKQLKDILFHEKLGTMLDKMTRIENMVIMLSCILNISEDKQQIIRDAASLAMSDLATAVVTEFTSLSGIMGRHYAIRDGYSEQIADALFEITLPRFSGDMLPKSDAGIVLAIADRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLNLKEALQLAADAQSIKVDPHVIDDVHQFVTRRLEQFLVDKGVSAEFVRSVLAERAKFPSLAAKSAYKMEELSRDTLFPKVVEAYSRPTRIVRGKEGELNMTVDEAAFETNEERVLWSTFLSVKESINPGLDIDDFVEISSQLIQPLEDFFNNVFVMVDDDKIRKNRLAMLKEISELPRGIADLTVLPGF 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00794 1047 Hamap Glycine--tRNA ligase beta subunit [glyS]. 384 1044 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 Gene3D Bira Bifunctional Protein; Domain 2 61 275 IPR045864 -
Aip09g00794 1047 SUPERFAMILY Class II aaRS and biotin synthetases 73 352 IPR045864 -
Aip09g00794 1047 Gene3D Class II aaRS and biotin synthetases; domain 2 276 355 - -
Aip09g00794 1047 Pfam Glycyl-tRNA synthetase beta subunit 387 910 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 MobiDBLite consensus disorder prediction 46 66 - -
Aip09g00794 1047 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 73 347 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 TIGRFAM glyQ: glycine--tRNA ligase, alpha subunit 73 357 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PANTHER GLYCYL-TRNA SYNTHETASE 383 1047 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 Pfam Glycyl-tRNA synthetase alpha subunit 74 351 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PRINTS Glycyl-tRNA synthetase alpha subunit signature 178 202 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PRINTS Glycyl-tRNA synthetase alpha subunit signature 204 224 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PRINTS Glycyl-tRNA synthetase alpha subunit signature 126 141 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PRINTS Glycyl-tRNA synthetase alpha subunit signature 147 167 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PRINTS Glycyl-tRNA synthetase alpha subunit signature 227 242 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 PRINTS Glycyl-tRNA synthetase alpha subunit signature 312 328 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 TIGRFAM glyS: glycine--tRNA ligase, beta subunit 578 1044 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 CDD GlyRS_alpha_core 73 351 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 720 1009 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 72 352 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Aip09g00794 1047 SUPERFAMILY HD-domain/PDEase-like 693 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00794 Aip-Chr9 10192138 10209754 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00794 K14164 - gmx:100787365 1768.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00794 09 10192138 10209754 Aip09g00794 09 10192138 10209754 ECH