Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00746 ATGAACATTTTTGGGGCAAAGATAACAGGCACAGTTGTGCTAATGCAAAAGAATGTGTTAGATGTGAATAGCATAACTAGTGTTGAGGGTATTCTTGACACAAGCCTGGGGGGTGTTATCTCAATAGTTGATACCCTCTCTTCTTTCTTGGGCTTTTCGGTCGCATTTCAGTTGATTAGTGCTACTAAACCAGATTCAAGTGGCAAAGGAAAAGTTGGGAATACAGCTTATTTAAAAGGAATTATTGACAATTTGCCAACTTTGGGAGACAAACAAAATGCATTCAAGATTGAATTTGATTATGATAGTAACTTTGGGATTCCAGGAGCATTTTACATAAAGAACTATATGTCAAATGAGTTCTTGCTTCTCAGTTTGACTCTTGAAGATATTCCAAATGTTGGAACCATCCACTTTGTTTGCAACTCCTGGATTTACAATGCCAAAAACTATCAATCTGATCGCATTTTCTTCGCCAACAATACATACCTACCAAGTAAAACACCAGGTCCACTAGTGTACTACAGAGACCTTGAATTGAAGAATTTAAGAGGAAATGGGACCGGGGAAAGAAAGGAATGGGAAAGAATATATGATTATGATGTTTACAATGATTTGGGCGATCCAGACAAAGGTGTGGAATATGCTCGTCCAGTTCTTGGAGGATCTTCTACTTATCCTTACCCTAGGAGGGGTAGAACTGGTAGAAAACCAACAAAAACAGATCCTAACACCGAAAGTAGAAGTGATAATTTCTATATTCCAAGAGATGAAGCCTTTGGTCACTTGAAATCGTCAGACTTCTTAGCTTATGGAATTAAATCAATATCCCAAGATGTAATCCCAGCTTTGAAATCAGTGTTTGACATAAATTTCACACCAATTGAGTTTGATAGCTTTGAAGAAGTTCATGATCTCTATGAAGGAGGGATTAAGCTACCCACAGATGTGATTAAGCAAATTACTCCTTTGCCTGTGGTCAATGAACTCCTTAGAACTGATGGTGAACAGTTCCTCAAGTTTCCTGTTCCTAAAGTTGTTCAAGTGAGTAAATCTGCATGGATGACTGATGTAGAATTTGCGAGAGAAATTCTTGCTGGCGTAAATCCTGGCTTAATTCGTTGTCTTCAAGAGTTTCCTCCAAAAAGTAAGCTAGACAGCGGAGTCTATGGTGATCATACAAGTACAATAACCAAAGAGCAAATAGAGCCCAATTTAGATGGGCTCACCATAGATGAGGCAATCCAGCAAAAGAAGGTGTTCATATTAGATGATCATGATGCAATATTTCCATATTTAAGGAGAATAAACTCAACTAATTCAAAGGCATATGCTACTAGAACCATCCTTTATTTGAAGAGTGATGGAACTTTGAAGCCACTTGCAATTGAGTTAAGTTTGCCACACCCTGAAGGAGACCAATATGGTGCCATTAGTAAAGTCTACTTGCCTGCAATTGAAGGTGTTCAAAGTTACATTTGGCTTCTGGCCAAAGCTTATGTCATCGTCAATGATTCAAACGTTCATCAACTTATCAGCCACTGGTTAAACACTCATGCAGTTGTGGAGCCATTCGTGATAGCAACTAACAGGCAGCTCAGTGTGCTTCACCCAATTTACAAGCTTCTATTTCCACATTATCGTGACACTATGAATATAAATGCTCTTGCTCGTAATCAACTTATCAATGCAGGTGGCATTATTGAACAAACTTTCTTGCCTTCTAAGTATGCCATGGAAATATCTTCCGTCATTTATAAGGATTGGGTTTTTACAGATCAAGCTCTACCTTCTGATCTTATCAAGAGAGGAATGGCGATTGCGGATGCAAGTTCCCCGAACGGTGTTCGTCTTGTGATAGAGGATTATCCTTACGCCATGGACGGACTAGAAATCTGGGGAGCCATTAACACATGGGTCCAAGACTACGTTTCTCTATACTACACCTCAGACGACACAGTCAAGGGAGACCTCGAACTCCAACAATGGTGGAAAGAGCTTGTAGAGGTTGGTCATGGAGACAAGAAAGACGAGCCATGGTGGCCTCAGATGCAAACTCTCCAAGACCTAATTCAAACTTGCACCACACTCATATGGACCGCTTCGGCGCTTCACGCTTCCGTTAACTTCGGTCAGTATCCGTACGGCGGTTTCATCCTAAACCGACCAACTCTGAGTCGCAGGTTGATGCCGGAAGAGGGAAGTCCCGAGTACGATGAGCTTGTCAAAAACCCTGAACGGGCTTACTTAAGAACGGTTACACCCAAGTTTCAAACTCTGATTGATCTTTCAGTTATTGAGATTTTGTCAAGGCATGCTTCTGATGAATACTACCTTGGTAACAGAGATAGTGCTGAGTTTTGGACCTCTGATGTTTATGCTTTAGAAGCTTTTAAGAAGTTTGGGAACAAGTTGGCGGAAATTGAAGGAATTCTGATTCAAAGGAACAATGATGTGAATTTGAGAAACAGAGTTGGACCTGTTACTATGCCTTATACTCTGCTCTATCCTACAAGTGAAGCTGGGTTAACTTTCAGGGGAATTCCTAATAGTATCTCTATCTAG 2565 0.4039 MNIFGAKITGTVVLMQKNVLDVNSITSVEGILDTSLGGVISIVDTLSSFLGFSVAFQLISATKPDSSGKGKVGNTAYLKGIIDNLPTLGDKQNAFKIEFDYDSNFGIPGAFYIKNYMSNEFLLLSLTLEDIPNVGTIHFVCNSWIYNAKNYQSDRIFFANNTYLPSKTPGPLVYYRDLELKNLRGNGTGERKEWERIYDYDVYNDLGDPDKGVEYARPVLGGSSTYPYPRRGRTGRKPTKTDPNTESRSDNFYIPRDEAFGHLKSSDFLAYGIKSISQDVIPALKSVFDINFTPIEFDSFEEVHDLYEGGIKLPTDVIKQITPLPVVNELLRTDGEQFLKFPVPKVVQVSKSAWMTDVEFAREILAGVNPGLIRCLQEFPPKSKLDSGVYGDHTSTITKEQIEPNLDGLTIDEAIQQKKVFILDDHDAIFPYLRRINSTNSKAYATRTILYLKSDGTLKPLAIELSLPHPEGDQYGAISKVYLPAIEGVQSYIWLLAKAYVIVNDSNVHQLISHWLNTHAVVEPFVIATNRQLSVLHPIYKLLFPHYRDTMNINALARNQLINAGGIIEQTFLPSKYAMEISSVIYKDWVFTDQALPSDLIKRGMAIADASSPNGVRLVIEDYPYAMDGLEIWGAINTWVQDYVSLYYTSDDTVKGDLELQQWWKELVEVGHGDKKDEPWWPQMQTLQDLIQTCTTLIWTASALHASVNFGQYPYGGFILNRPTLSRRLMPEEGSPEYDELVKNPERAYLRTVTPKFQTLIDLSVIEILSRHASDEYYLGNRDSAEFWTSDVYALEAFKKFGNKLAEIEGILIQRNNDVNLRNRVGPVTMPYTLLYPTSEAGLTFRGIPNSISI 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00746 854 ProSitePatterns Lipoxygenases iron-binding region signature 1. 509 523 IPR020833 GO:0016702|GO:0046872
Aip09g00746 854 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 162 854 IPR013819 GO:0016702|GO:0046872
Aip09g00746 854 ProSitePatterns Lipoxygenases iron-binding region signature 2. 536 546 IPR020834 GO:0016702|GO:0046872
Aip09g00746 854 SMART LH2_4 6 160 IPR001024 GO:0005515
Aip09g00746 854 PRINTS Plant lipoxygenase signature 129 147 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 155 176 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 194 210 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 227 246 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 294 315 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 339 355 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 378 397 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 444 468 IPR001246 GO:0016491
Aip09g00746 854 PRINTS Plant lipoxygenase signature 766 780 IPR001246 GO:0016491
Aip09g00746 854 Pfam PLAT/LH2 domain 62 158 IPR001024 GO:0005515
Aip09g00746 854 MobiDBLite consensus disorder prediction 221 251 - -
Aip09g00746 854 SUPERFAMILY Lipoxigenase 164 854 IPR036226 -
Aip09g00746 854 Gene3D - 264 352 IPR027433 -
Aip09g00746 854 Gene3D - 487 853 - -
Aip09g00746 854 PRINTS Lipoxygenase signature 491 508 IPR013819 GO:0016702|GO:0046872
Aip09g00746 854 PRINTS Lipoxygenase signature 509 526 IPR013819 GO:0016702|GO:0046872
Aip09g00746 854 PRINTS Lipoxygenase signature 529 549 IPR013819 GO:0016702|GO:0046872
Aip09g00746 854 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 6 163 IPR036392 GO:0005515
Aip09g00746 854 ProSiteProfiles PLAT domain profile. 28 159 IPR001024 GO:0005515
Aip09g00746 854 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 5 854 - -
Aip09g00746 854 Gene3D - 164 263 - -
Aip09g00746 854 Gene3D PLAT/LH2 domain 3 163 - -
Aip09g00746 854 Gene3D - 353 486 - -
Aip09g00746 854 Pfam Lipoxygenase 172 837 IPR013819 GO:0016702|GO:0046872
Aip09g00746 854 PANTHER LIPOXYGENASE 5 854 IPR000907 GO:0016702|GO:0046872
Aip09g00746 854 CDD PLAT_LH2 7 160 IPR042057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00746 Aip-Chr9 9370126 9378090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00746 7 854 Acyl Lipid Metabolism Gene Families AT1G55020 59.070 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00746 K15718 - gmx:547869 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00269 08 2028321 2034422 Aip09g00746 09 9370126 9378090 PCT