Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00688 ATGATTGAGGGCTTCGACCAGTGCAATTCGATGTTGTGCTGGGAAGAAGAAGCTGAAATGCCAAAAGTTGAATTTCAGGAATCTGGTCCTGCTTTGAAGAAAGCCAAGAAAACCATTTTGGCTGCTGAAAATGTCGACAGCTATGAAGTGGCTGAAAGCCAGGACAGACTTGGTGACTTACCGGATTGCCTTATCCATCATATATTGTCGTTTATGGAAACGAAGGATGCGATTCGAACATGTGTTTTATCTAAAAGGTGGAGGTATATTTGGGCTTCAGTTCCCTGCTTGAACTTCAGCAGCAAGTCATTCAATCGGTTGGTTGATTTCAAGAAATTTGTGTTGTGGGTTCTATCCCATCGGGATGATTCTCAGGTCAAGGTTCTTATTTACTATCGCTTCGGGGTGGATTACGCAACAGATCAGTATCTGTTGAATAAGGTTATTGAATATGCAACATATCATGGTGTTGAAGAAATCAGAATCAATCTTCGGGCTAAAACCTCTGGCAGCCCACCTGTTGAAATCCCTTTGCCTCTATTTACTTGTCAGTCTTTGAAACGGCTTGAGTTAAAAGATTGCAATCCTACAAATGTCTCGTCCCCCGTTGGCTGCAAGTCATTGGAAACGTTGCACCTGGAACATTTTTCAATGTATCCTGCTGCAGCTGACTTTATGAATCCATTTTCAAGTTTGGCGGAACTCTTTGGTTTTACAACATTGACGACTTTGCACCTTAACAGCTTCACTCTGTGTTATACAGGAATTGACTGTCTCAACCCATTTGCTACATGTGTCAATTTGAAGAATTTGCACTTAGGTGAAATGTCCTTTAAGTCCGATTTGAACCCTAAGGATTTTGTTATATCTGCTCCCAAACTCAAAAACTTGAGCCTAATGTGCAACCGCTTCAAATGTAAGATTGTAGTTGCTGCGCCAACTCTTACCAATTTCAGCTACTTGTATTCTACATCTTGTGCCTTCTTTGAGTTCAGTCTTCCATCTTTGGATGGCTTGGTCATTGATATTCATGAACCGCGTGATCAATTGGAAAAATCAATCCGGAGGAAGAGAGAGGAGACTTTGCATGGTTTGATCAATATGATACGGGGACATTGTAAATCTGAAGCAGTTAAACTATCATTCTGTACAGTAGCGGTTACCTGTGGTACTGCAGTTTTTCTAAAGCCAGAGTTTTACTCCTGTAGTAAATTGAAATCATTGAACTTCGGGGTGGGTTCAACATACAAAATCTTCATTAGCAACCTTGACAATATAACGGCCTACTTCCGCGATTGCTCTCAACATGCAGATTTTGAAATCCTGACTATTTAG 1335 0.409 MIEGFDQCNSMLCWEEEAEMPKVEFQESGPALKKAKKTILAAENVDSYEVAESQDRLGDLPDCLIHHILSFMETKDAIRTCVLSKRWRYIWASVPCLNFSSKSFNRLVDFKKFVLWVLSHRDDSQVKVLIYYRFGVDYATDQYLLNKVIEYATYHGVEEIRINLRAKTSGSPPVEIPLPLFTCQSLKRLELKDCNPTNVSSPVGCKSLETLHLEHFSMYPAAADFMNPFSSLAELFGFTTLTTLHLNSFTLCYTGIDCLNPFATCVNLKNLHLGEMSFKSDLNPKDFVISAPKLKNLSLMCNRFKCKIVVAAPTLTNFSYLYSTSCAFFEFSLPSLDGLVIDIHEPRDQLEKSIRRKREETLHGLINMIRGHCKSEAVKLSFCTVAVTCGTAVFLKPEFYSCSKLKSLNFGVGSTYKIFISNLDNITAYFRDCSQHADFEILTI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00688 444 Gene3D - 43 97 - -
Aip09g00688 444 Gene3D Ribonuclease Inhibitor 147 340 IPR032675 -
Aip09g00688 444 PANTHER F-BOX PROTEIN-LIKE 41 444 - -
Aip09g00688 444 SUPERFAMILY L domain-like 174 332 - -
Aip09g00688 444 Pfam F-box domain 59 94 IPR001810 GO:0005515
Aip09g00688 444 SUPERFAMILY F-box domain 53 111 IPR036047 GO:0005515
Aip09g00688 444 SMART fbox_2 60 100 IPR001810 GO:0005515
Aip09g00688 444 PANTHER CYCLIN-LIKE F-BOX 41 444 - -
Aip09g00688 444 ProSiteProfiles F-box domain profile. 54 107 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00688 Aip-Chr9 8363097 8364541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00688 50 218 EF-hand Containing Proteins AT5G41840 32.632 5.79e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00688 - - vun:114167379 707.597