Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00554 ATGAATTCTGCAATGGATGATATGAATTTAATTCAGCAAGCCCAGAGGCATCACTTGGTTGTGAGGGAGATTGGTGAAGAGATTGACTTAGAAATTGGGCCTGGGGATGACGATCCTCCGTTTGGTAACACTATAATTGTTGCCCCGATGCGGGAATCTTCTGTTGAGGAACATGGTGAGAGCAAACAGATGGGGATGGTTTCTCAGCTTCCAAATGATGCTCAAGATATGTCGAAGAATCAACCGGTGAAACGTAAGAAGAAGGTTGTTAAAAGATGGAGAGAGGAATGGGCAGACACCTACAAATGGGCATATGTTGATGTAAAAGAGGGGACGGCAAGGATTTTTTGCTCTGTCTGCAGGGAGTATGGCAGGAAGCACAGAAGAAACCCTTATGGGAATGAGGGCAGTCGAAATATGCAGATGAGTGCTTTAGAAGAACATAATAACAGCTTGCTTCACAAGGAGGCTCTTCGCCTTCAAATGGCCTCAAAAGAGAAAATTGTCGCTGACAAGCCTGTTTATGTAAAAGCTGTTATGTCAAAAACAGCGGGATCCATTCTTGAAGCTACACTGAAAAGGGATCCTCATGAGGCTGAATTCATTCAGGCAGTCCAGGAGGCAATTCAAGCTCTAGAGAGAGTCATAGCGAAAAGTTCGCATTATGTCAATATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTCCATGGTTGGATGATAGGGGCGAGATACATGTTAATCGGGGATTTCGTGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTATTGCCAAGTTCCTTGGTTTTGAACAGGCATTAAAGAATGCCTTATCACCATACAAATTGGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGGTTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGATACTTGGGTCCTGACAGGGACCTTCCATCAGAGGAAATAGGTGTTGGTACTCGAGAAATGGGGTATCTGTTTGGACAGTATAGACGCCTAGCCGGTAATTTTCAGGGAAGTTTTACAGGGCCAAGGATATTTTGGTCTGGTGCCAGTCTTCGAACTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTTTCTGACATGAATAAAGAACTCAAAGGATTAAGATGCGTGGTGAGTGGTTCTGGAAAGATTGCAATGCATGTTTTGGAGAAGCTAATTGCTTATGGTGCTCTTCCCGTTTCCGTATCAGATTCTAAAGGATATTTGGTTGATGAGGATGGATTTGACTACATGAAAATACAATTTCTGAGAGACATCAAAGCTCAACAGAGAAGTTTGAGAGACTATTCAAAGACATATGCTCGATCCAAATATTATGATGAAGCAAAACCCTGGAATGAAAGGTGTGATCTTGCATTTGCATGTGCTTCACAGAATGAAATTAATCAATCCGATGCCATGAATTTGGTTAATTCAGGTTGTCGTATACTAGTAGAAGGTTCAAACATGCCTTGTACCCCGGAGGCAATTCAAGTTCTACGGAAAGCTAATATTCTTGTTGCTCCTGCAATGGCAGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAATTGAATCACGAATGCAGTTTGATGCACTGGTCACCTGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTTTGAAAGCTGCAACTGATTTCGGTTATCAAAAAGAAAATCCTGAGGCTCTGGTACATGGATCAGTCATCTCTTCCTTTCTGACCATTGCTCAAGCAATGACTGATCAAGGCTGTGTATAG 1884 0.4262 MNSAMDDMNLIQQAQRHHLVVREIGEEIDLEIGPGDDDPPFGNTIIVAPMRESSVEEHGESKQMGMVSQLPNDAQDMSKNQPVKRKKKVVKRWREEWADTYKWAYVDVKEGTARIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKEKIVADKPVYVKAVMSKTAGSILEATLKRDPHEAEFIQAVQEAIQALERVIAKSSHYVNIMERLLEPERMIVFRVPWLDDRGEIHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSIAKFLGFEQALKNALSPYKLGGAAGGSDFDPKGKSDNEVMRFCQSFMSEMYRYLGPDRDLPSEEIGVGTREMGYLFGQYRRLAGNFQGSFTGPRIFWSGASLRTEATGYGLVFFAQLMLSDMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPVSVSDSKGYLVDEDGFDYMKIQFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDLAFACASQNEINQSDAMNLVNSGCRILVEGSNMPCTPEAIQVLRKANILVAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRALKAATDFGYQKENPEALVHGSVISSFLTIAQAMTDQGCV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00554 627 Gene3D Leucine Dehydrogenase, chain A, domain 1 230 365 - -
Aip09g00554 627 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 378 625 IPR006096 GO:0006520|GO:0016491
Aip09g00554 627 Gene3D Glutamate Dehydrogenase, chain A, domain 3 186 229 - -
Aip09g00554 627 Gene3D - 384 549 - -
Aip09g00554 627 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 186 371 IPR046346 -
Aip09g00554 627 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 289 303 IPR006095 GO:0006520|GO:0016491
Aip09g00554 627 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 368 390 IPR006095 GO:0006520|GO:0016491
Aip09g00554 627 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 410 430 IPR006095 GO:0006520|GO:0016491
Aip09g00554 627 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 547 558 IPR006095 GO:0006520|GO:0016491
Aip09g00554 627 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 232 359 IPR006097 GO:0006520|GO:0016491
Aip09g00554 627 SMART ELFV_dehydrog_3 379 625 IPR006096 GO:0006520|GO:0016491
Aip09g00554 627 PANTHER BNAA06G02140D PROTEIN 1 627 - -
Aip09g00554 627 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 380 625 IPR036291 -
Aip09g00554 627 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 1 627 - -
Aip09g00554 627 Gene3D Glutamate Dehydrogenase, chain A, domain 3 556 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00554 Aip-Chr9 6070445 6078168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00554 225 505 EF-hand Containing Proteins AT5G07440 28.826 6.37e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00554 K00262 - gmx:100788009 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00554 09 6070445 6078168 Aip09g00554 09 6070445 6078168 ECH