Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00553 ATGACCGACTATACTCAAGAACAGGAGATGGAGATCGAAGCATTAGAAGCTATACTTATGGATGAATTCAAAGAAATACACTCCGGTGAAAGTGGCCTAAGTACTTCTAACCGCTGCTTCCAAATAACGGTCTCTGCCCAGGATGATGATACTGATGGATCATTTAACAATCCAGCTCAACTGGCTTTGATCTTCTCACATACAGAAAAGTATCCTGATGAACCTCCTCTTCTGAATGTGAAAAGTTTACAAGGAATAAATACTGAAGATTTAAAGAATTTGAAAGAGAAACTTATCCAAGAGGCATCTGAAAATCTGGGAATGGCTATGATCTACACTCTGGTTACCTCGGCTAAAGAGTGGTTGGCTGAGAAGTTTCAAGACACTGAAGCTGCAGAGGCTGAAGCAGAAGAGGCAGCCAAGGATGATGTAGTGGTACCCCATGGGGAACCAGTTACCCTTGAGACATTTTTGGCATGGAGAGAAAGGTTTGAAGCTGAACTGGCGCTGGAGCGAGCCAAAGAAGTTAAGTGTGACTTGGTTAAAATTAAGCCGTATCCACTGGTTCACTGCATATCAAGATTAATGACACTTGAATATGTTCGAATCTTAAATATCATGAAAGGTGCAGCGGCTGTCAATGAGGAATCTGAAGAGGAGGATGAGGAAGATATTGATTTTGATGATGACGATTTTGAAGTTGATGAAGAGGATATGCTTGAACATTACCTGGCCGAAAAATCTGATTCATCCACACATTCCTCCAAGAGAGCTAGTTAA 780 0.4141 MTDYTQEQEMEIEALEAILMDEFKEIHSGESGLSTSNRCFQITVSAQDDDTDGSFNNPAQLALIFSHTEKYPDEPPLLNVKSLQGINTEDLKNLKEKLIQEASENLGMAMIYTLVTSAKEWLAEKFQDTEAAEAEAEEAAKDDVVVPHGEPVTLETFLAWRERFEAELALERAKEVKCDLVKIKPYPLVHCISRLMTLEYVRILNIMKGAAAVNEESEEEDEEDIDFDDDDFEVDEEDMLEHYLAEKSDSSTHSSKRAS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00553 259 Pfam RWD domain 6 122 IPR006575 GO:0005515
Aip09g00553 259 SUPERFAMILY UBC-like 1 127 IPR016135 -
Aip09g00553 259 Coils Coil 122 142 - -
Aip09g00553 259 Gene3D Ubiquitin Conjugating Enzyme 1 131 IPR016135 -
Aip09g00553 259 ProSiteProfiles RWD domain profile. 10 125 IPR006575 GO:0005515
Aip09g00553 259 PANTHER RWD DOMAIN-CONTAINING PROTEIN 2 251 IPR040213 -
Aip09g00553 259 PANTHER RWD DOMAIN-CONTAINING PROTEIN 1-RELATED 2 251 - -
Aip09g00553 259 SMART RWD2001b 10 125 IPR006575 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00553 - - adu:107464170 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00553 09 6065012 6069050 Aip09g00553 09 6065012 6069050 ECH