Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00540 ATGAAAGAGAATGTGGAACTGGTATTTGAGATTTGTGTGGTGATTCCCAAGAGAGAGGCGGTTCTTAAAGGAGAGGAAGACTTCGATTGCGGCAATGTCTTTGCCAGGGAGCTTAAGAATGCAGGCTTGGTTGTTGACAGAGTTATTGGCAATTCAGATGAGTTCTTCAAGGTGGCTGCACCTTTGGAGACATTGGGGAGGGCTGCAGCTGAACTAAGAATCATGAAAAGAACTCACATTGGTATGGATTTGCAATTTGATATGGTGGAGGTTGATGCTTTTGTCAAACAGCCAGATGGTTCACTCTTTAGTTGGTATGAACGTTTTCAGTGCTACTGCCACTTAATGCACGGAATTGTAAACAACAGCAAATCAAGCAGAATCCTTAAATTCAATAGAAGAGAAATCCGTTGGGAAGTAGGAGAGCATCTCCTTCCAAAATTGGAATCAGAGATCATTATTAAGCAAATCTTTCCTTTGCATGATGACAAGATTAGAAAGAAACTCCTTAAAACCTGGGCTCTTCAATGGTGGGACTTCACAACTCAGCCAGTAGATGAAATTTATGCATATTATGGTTCAAAGATTGCAATCTATTTTGCTTTTCTTGGAATGTATACACAGTGGCTGCTCTTCCCTGCTGTGGTTGGGCTTATTGTGTACTTCATAGATTATGGGTCAGCGAATTTAGTAGTGCTCCCTGCTTTCTTCATTGCGGTCATACTATGGGCTATTATGTTTTCTCAGTTCTGGAAACGGAAAAATGCTGCACTTTTAGCCAGGTGGCCTATTACCTATGGAAATGCAGTTGATGAAGAATACAAGGTTGCTGGCATGAAGGGTAATGCTCAACCCCGACAGAACCCAATGGACCTCATAAAATTACTCGAGGCTGATAGAGTGAAGGGAAAGAAAGTGTTCACGAAATATGAGTGGTTTAATCATCTCTTGCGAATCAGGAACGATGCACTCATTATCATCAGCATAATATGCCTCCAGTTACCATTTGAGTTGGCATATGCTCATCTTTATGAAGTTCTTAATAAAGATATAATTAAGTTTGGGCTCACTGCTATTTATCTTGCTACCATTCAGTACATTACTAAGCTTGGTGGTAAGGTTTCTGTTAAACTTATCATGTTTGAACACAATGAAAACCCGGAAACACGAGCTGATAGCTTGGTCTACAAGGTGTTTGGTCTGTACTTTATGCAGACATACATTGGAATCTTTTATCACGCGTTGTTGCACCGAAACTTTGGTACTCTTCGCAAAGTTCTGATTCAGCGGCTTCTAATTTCGGAGGTGGTTCAAAACTTGATAGAAACTTCATTGCCTTATATCAACTACAACTACAAAAAATATGCCGTTCGACAAAATAAGGAGAAGGAGGAGAAAGGATCAGCTGGAACATTCGAGTTTACTTCTAGAGTAGAGAAAGAATTCCTTAAGGCTTCTTACACTGCCAGCACTGGCGAGGAGCTTGAGGATGGGTTATTTGATGATTTTTTGGAGTTGGCACTGCAGTTTGGAATGATTTTGATGTTTGCTTGCGCATTCCCACCTGCATTCGCTATGTCTGCTCTGAACAACATTATGGAAATCAGGACAGATGCTTTGAAGCTACTAGCAATGATGAAGCGGCCTGTCCCTCGTGCGTCTGCAACAGTAGGAGCCTGGCTTAACATTTTTCAGTTTCTCATATTGATGTCCATTTGCACTAATTGTGCACTTCTAGCATGGCTATTCGATGAGGAGGGAAAATGGAAGATCGAGCCGGGACTCGTGGTGATTTTGATAATGGAGCATGCTCTATTGTTGATTAAGTTTGGTTTCTCTCGTTTGGTTCCTTCGGAACCAGCTTGGGTTAGAGCAGCCCGTGCGAAAAACAGTTCGCAAGCACGAGACATGTATACTAAGAGGCTCTTGAGGACCATTTCTGGAGGAGAAAAGACAAGAGAGCTGAAGAAGATTGAGTAA 1980 0.4162 MKENVELVFEICVVIPKREAVLKGEEDFDCGNVFARELKNAGLVVDRVIGNSDEFFKVAAPLETLGRAAAELRIMKRTHIGMDLQFDMVEVDAFVKQPDGSLFSWYERFQCYCHLMHGIVNNSKSSRILKFNRREIRWEVGEHLLPKLESEIIIKQIFPLHDDKIRKKLLKTWALQWWDFTTQPVDEIYAYYGSKIAIYFAFLGMYTQWLLFPAVVGLIVYFIDYGSANLVVLPAFFIAVILWAIMFSQFWKRKNAALLARWPITYGNAVDEEYKVAGMKGNAQPRQNPMDLIKLLEADRVKGKKVFTKYEWFNHLLRIRNDALIIISIICLQLPFELAYAHLYEVLNKDIIKFGLTAIYLATIQYITKLGGKVSVKLIMFEHNENPETRADSLVYKVFGLYFMQTYIGIFYHALLHRNFGTLRKVLIQRLLISEVVQNLIETSLPYINYNYKKYAVRQNKEKEEKGSAGTFEFTSRVEKEFLKASYTASTGEELEDGLFDDFLELALQFGMILMFACAFPPAFAMSALNNIMEIRTDALKLLAMMKRPVPRASATVGAWLNIFQFLILMSICTNCALLAWLFDEEGKWKIEPGLVVILIMEHALLLIKFGFSRLVPSEPAWVRAARAKNSSQARDMYTKRLLRTISGGEKTRELKKIE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00540 659 Pfam Calcium-activated chloride channel 188 629 IPR007632 -
Aip09g00540 659 PANTHER NGEP-RELATED 6 647 IPR007632 -
Aip09g00540 659 PANTHER BNAC06G23840D PROTEIN 6 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00540 Aip-Chr9 5908532 5913566 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00540 K19327 - gmx:100792403 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00540 09 5908532 5913566 Aip09g00540 09 5908532 5913566 ECH