Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00538 ATGGCTTCCTTCACTTTGTTCTTTCTCTCCATCACCATCATCCTCCATGTCTTTTTTGCCGCAACACCCTCCTCCTCAGTTTCAGAACAACTCTCATCATCAACAATCCCCACCAGGTTTCTCGATTTTGCCAAAAAGCCTGAAACTTTCGATTGGATGGTTGGGATCAGAAGGAAGATTCATGAGTACCCAGAATTGCTATATGAGGAATTTAAGACGAGTGAGGTCATAAGAGCAGAGTTGGACAAAATGGGAATTTCATATAAGCATCCAGTTGCTGAAACCGGTGTTATTGGATACATTGGAACTCGAAAACCTCCTTTTGTTGCTTTAAGAGGTGACATTGATGCTCTTCCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTAGATGAAAAGATGCATGCTTGTGCCCATGATGCTCACACTGCTATGCTTCTTGGTGCTGCTAAGATTCTCAAACAGCATGAACATCAGATAAAA 489 0.4254 MASFTLFFLSITIILHVFFAATPSSSVSEQLSSSTIPTRFLDFAKKPETFDWMVGIRRKIHEYPELLYEEFKTSEVIRAELDKMGISYKHPVAETGVIGYIGTRKPPFVALRGDIDALPMQEMVEWEHKSKVDEKMHACAHDAHTAMLLGAAKILKQHEHQIK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00538 163 PANTHER PEPTIDASE M20 FAMILY MEMBER 7 162 IPR017439 GO:0016787
Aip09g00538 163 Pfam Peptidase family M20/M25/M40 110 160 IPR002933 GO:0016787
Aip09g00538 163 SUPERFAMILY Zn-dependent exopeptidases 48 162 - -
Aip09g00538 163 Gene3D Zn peptidases 25 163 - -
Aip09g00538 163 PANTHER AUXIN CONJUGATE HYDROLASE 7 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00538 Aip-Chr9 5850347 5894132 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00538 K21604 K14664 gmx:100794121 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00538 09 5850347 5894132 Aip09g00538 09 5850347 5894132 ECH