Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00488 ATGGCCAATATTATTGTTCCTTCTCCAACCATTTTCACATCATCTTGTGTGTTAAGGAGTGAACAACAGCAACTTTTTGGAAGCATAGATTCTTCTTATTCTTTATGGAATTCTTGCATTCAACCAAGAAACAATTCTAGGAACAATTTTCAGCTGAAATGCTCAAATGGGCATCCACTAAATAGCGTTTCTTCCCATGATGGTGCAGTTGGAAGTTCATTGGCCAAAGAAGATAGCAAGCCTCAACCAACTGAAGCATCATATCCCTTGTCAGATTCAGAATGCATAGGATCCAACCTTAGCATAACTGTTGTTGGAGCTTCTGGAGACCTTGCCAAGAAGAAGATTTTTCCAGCACTCTTTGCTCTTTACTATGAAGATTGGCTACCTGAGAACTTCATTGTGTATGGTTATGCTCGGACCAAAATGACCGATGAAGAATTAAGGAACATGATTAGCAGAACTTTAACATGTAGAATTGACAAGAGGGAAAATTGTGAAGACAAAATGGATCAATTCTTGAAAAGATGTTTTTACCATTCTGGTCTGTATAACTCTGAGGATGATTTTTCAGACTTGGACTCCAAGCTGAAAGAAAAAGAGGATGGAAAAGATTCAAACAGGCTATTTTATCTGTCAATACCTCCAAATATATTTGTGGATGTGGTGAAATGTGCTAGCCTTAAAGCTTCTTCAAGAAATGGCTGGACAAGGTACCTATCTGAAGAACAAATATTCAGGATTGACCATTACTTGGGGAAGGAGCTTGTGGAGAATCTATCAGTGCTTCGTTTTTCAAATCTTGTTTTCGAACCTCTATGGTGCCGGAACTACATTCGAAATGTGCAGCTAATATTTTCAGAGGATTTTGGAACAGAAGGAAGAGGAGGTTATTTTGATAACTATGGAATCATTCGCGATATAATGCAAAATCACCTTCTGCAAATACTGGCCTTGTTTGCAATGGAAACTCCTGTGAGCTTGGATGCTGAGGACATCAGAAATGAAAAGGTGAAGGTTCTTAGATCAATGAGACCAATTCAGTTAGAAGATGTTGTTGTTGGTCAATATAAGGGCCACAACAAGGGTGGGAAATCATATCCTGGTTACACAGATGATCCTACTGTTCCAAAGGATAGTCTAACTCCAACATTTGCAGCAGCCGCGCTTTTCATCGACAATGCAAGATGGGATGGAGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTCCAATTCAGGCATGTACCAGGTAACTTGTACAAGAGGAACTTTGGAACTGATCTGGACAAGACTACGAATGAGCTTGTGCTTCGAGTTCAACCTGATGAAGCTATATACTTGAAAATCAATAACAAGGTTCCTGGTCTGGGAATGCGACTAGATCGAAGCGACTTAAATTTGCTTTATAGAGCAAGGTATCCAAGGGAAATACCAGATGCATATGAGAGATTACTCTTGGATGCAATAGAAGGGGAAAGAAGGTTGTTCATTAGAAGTGATGAGCTTGATGCAGCTTGGTCACTCTTCACCCCATTGCTCAAAGAGATTGAGAGCAAGAAGATTGCTCCAGAGCTATATCCTTATGGTAGTAGAGGACCTGTTGGAGCACATTACCTTGCTGCAAAGCACAATGTAAGATGGGGTGATCTTGGTATTGAAGAATAA 1692 0.4007 MANIIVPSPTIFTSSCVLRSEQQQLFGSIDSSYSLWNSCIQPRNNSRNNFQLKCSNGHPLNSVSSHDGAVGSSLAKEDSKPQPTEASYPLSDSECIGSNLSITVVGASGDLAKKKIFPALFALYYEDWLPENFIVYGYARTKMTDEELRNMISRTLTCRIDKRENCEDKMDQFLKRCFYHSGLYNSEDDFSDLDSKLKEKEDGKDSNRLFYLSIPPNIFVDVVKCASLKASSRNGWTRYLSEEQIFRIDHYLGKELVENLSVLRFSNLVFEPLWCRNYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPIQLEDVVVGQYKGHNKGGKSYPGYTDDPTVPKDSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKTTNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRARYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWSLFTPLLKEIESKKIAPELYPYGSRGPVGAHYLAAKHNVRWGDLGIEE 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00488 563 PIRSF G6PD 237 560 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 PIRSF G6PD 77 240 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 Gene3D Dihydrodipicolinate Reductase; domain 2 248 557 - -
Aip09g00488 563 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 249 556 - -
Aip09g00488 563 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 249 255 IPR019796 GO:0004345|GO:0006006
Aip09g00488 563 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 239 562 - -
Aip09g00488 563 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 104 238 IPR022674 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 262 IPR036291 -
Aip09g00488 563 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 238 557 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 262 556 IPR022675 GO:0004345|GO:0006006|GO:0050661
Aip09g00488 563 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 71 238 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 MobiDBLite consensus disorder prediction 66 90 - -
Aip09g00488 563 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 99 558 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 239 562 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 71 238 - -
Aip09g00488 563 Gene3D - 96 247 - -
Aip09g00488 563 PRINTS Glucose-6-phosphate dehydrogenase signature 239 267 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 PRINTS Glucose-6-phosphate dehydrogenase signature 309 325 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 PRINTS Glucose-6-phosphate dehydrogenase signature 396 422 IPR001282 GO:0006006|GO:0016614|GO:0050661
Aip09g00488 563 PRINTS Glucose-6-phosphate dehydrogenase signature 291 308 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00488 Aip-Chr9 5227718 5231005 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00488 K00036 - gmx:100801945 960.288