Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00462 ATGGAGAGAAGCCAACCAAGGAGGCAAGTTGCTGCCATGAAACAATCCCTTTTTGATCAGGGATTATTGGATGAACAATTTATCCAGTTGGAAGAGTTATCAGATGATGCTAATCCAAACTTTGTTGAAGAAATTGTCACCCTTTATTATCGTGATTCATCTCGCCTTATCTCAAGCATAGAACAAGCACTCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCACTCTCTTTAGGGAATATTGTAGGACAGGAAATGCTGAAGGAACACTCCGACGAACAAAACCCACTTCCCAATTCCCATTCTTCTTCTTCTTCTTCTTCTTCTTCACTATCTCTTATCGATTCATAGATTTCTTTGTACATTCTTCAGATTCTGCTTCTTCCAATTTTCCCCGTCGTCTTCACATTCTGCCCTTCCCTCCGCAATCTAGTCAAAACCCTAACCATCAGTATAATCAGAATTGGAGTGGTGGTTATGGTGGTGGTGGTGGTGGAGACCCTTCTACTTCAAATTCATTCCCTCCACAACCTTATAACCAAATGCCCCCAAATTCAAATTTCCATTCTCATGGTGGGGGTGCTGCACCACCACCTCCTCCTCCTTCCCATCACCCCTACCCTTATCCACCACCTCCACCGCCACCACCCGAAAATTCATACCCGCCTCCACCTCCACCACCACCTTCTTCACATGGTGCTCCTATGTTTTACCCTTCTAGTCAATACTCTCAGTATGGGCAGCAGCCACCTCCACCACCTCCCCCTCTGCCTCCATCTTCGCCTCCGCCGAGCAATTCTATCCCACCTCCACCCCCTCCACCTTCCTCGCCACCTCCTCCTCCTGCTTCAGCTCCTCCCCCGCCGCCACCAAAGGATGAGAGACGGATGCATAGCCGAGATAAAGGGCCGATAAAGGAAGGTTATGAGCATTCAAATCATGGAAATCCTCATAAACAGCAGAAGCCTTCTGCTGTTCCTCCAATGCCAGTGAAGAAGCCGAACGGGGTGCAGGGGAGGGTTGAGACAGAAGAAGAGAGGAGGTTAAGGAAGAAGAGAGAATTTGAGAAGCAGAGGCAAGAAGAGAAGCATAGGCAGCAGCTGAAGGAATCACAGAACAGTGTCTTGCAGAAGACTCAGATGATGTCATCTGGGAAGGGGCATGGTTCGGGTTCGGTTGCAGGGTCTCGAATGGCAGCAGAGAAGAGAACTACACCCTTATTGAGTGCGGAGAGAATTGAAAATAGGTTGAAAAAGCCAACAACATTTTTGTGCAAAATGAAATTCCGAAATGAACTTCCAGATCCAAGTGCACAACCTAAGCTTATGGCGTTCAAGAGGGATAAAGATCAATATACGAAATATACAATCACATCGCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAACCAGATCTTGGGATTCCTCTGGACCTGCTTGACCTCAGTGTTTATAACCCTCCCAGTGTCAGACTACCTCTTGCTCCTGAAGACGAAGATTTGTTGCGAGATGATGTTGCGGCTACTCCTATAAAGAAAGACGGCTTAAAAAGAAAAGACAGGCCTACTGATAAAGGTGTAGCTTGGCTTGTCAAAACACAATATATATCTCCCCTCAGCATGGATTCAACAAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAGAGGAGGCCGCAGCATGTTGGACAGTCGTAACAATAGAGTCTTAGTTTTTCATACTAGAAGGAAGACCTGCTATATGACATTATATCTTATCATATTGATTGAGCTGCCTTCTATACTGCTTTGCAGGTATGATGAACAGTTTGTTATTGCTGCATTTGATAATGCTCCTACAGCTGATTCAGAAATGTATGGTAAGTTGGACAAATCTGTTCGTGATGCCTGTGAATCAAAGGCACTTATGAAAAGTTATGTTGCAACTGGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCTTACATGACCCCAACACCTGGACAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCATATTCTTGGGTTCGCGAGTATCACTGGGATGTTCGGGGTGATGATGCAGATGACCCTACAACATTCTTAGTTGCATTTGATGAGTCAGAAGCACGTTATTTGCCTCTTCCAACAAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAAGTGATGAGGTCGAGCAATTTCCAATACCTGCAAGAGTGACTGTAAGGCGAAGGTCGAATGTTGCAGCAATCGAGCGAAAGGATTCACAGGTTTATACAAGTTCGAAAGCCAGTACTTCAAAGAGAAGGGGTCTAGAAATGGATGATGATCTCGAACAGCATCATCGACACAATTATCAATCTAGTGGAGCTGAAGATGACATGTCTGATTAA 2406 0.4464 MERSQPRRQVAAMKQSLFDQGLLDEQFIQLEELSDDANPNFVEEIVTLYYRDSSRLISSIEQALIGAKKVKAECTLFREYCRTGNAEGTLRRTKPTSQFPFFFFFFFFFTISYRFIDFFVHSSDSASSNFPRRLHILPFPPQSSQNPNHQYNQNWSGGYGGGGGGDPSTSNSFPPQPYNQMPPNSNFHSHGGGAAPPPPPPSHHPYPYPPPPPPPPENSYPPPPPPPPSSHGAPMFYPSSQYSQYGQQPPPPPPPLPPSSPPPSNSIPPPPPPPSSPPPPPASAPPPPPPKDERRMHSRDKGPIKEGYEHSNHGNPHKQQKPSAVPPMPVKKPNGVQGRVETEEERRLRKKREFEKQRQEEKHRQQLKESQNSVLQKTQMMSSGKGHGSGSVAGSRMAAEKRTTPLLSAERIENRLKKPTTFLCKMKFRNELPDPSAQPKLMAFKRDKDQYTKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRLPLAPEDEDLLRDDVAATPIKKDGLKRKDRPTDKGVAWLVKTQYISPLSMDSTKQSLTEKQAKELREMRGGRSMLDSRNNRVLVFHTRRKTCYMTLYLIILIELPSILLCRYDEQFVIAAFDNAPTADSEMYGKLDKSVRDACESKALMKSYVATGSDPANPEKFLAYMTPTPGQLSKDIYDENEDVSYSWVREYHWDVRGDDADDPTTFLVAFDESEARYLPLPTKLVLRKKRAKEGRSSDEVEQFPIPARVTVRRRSNVAAIERKDSQVYTSSKASTSKRRGLEMDDDLEQHHRHNYQSSGAEDDMSD 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00462 801 SUPERFAMILY Formin homology 2 domain (FH2 domain) 269 414 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 757 771 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 337 368 - -
Aip09g00462 801 Pfam Paf1 604 759 IPR007133 GO:0006368|GO:0016570|GO:0016593
Aip09g00462 801 Pfam Paf1 422 557 IPR007133 GO:0006368|GO:0016570|GO:0016593
Aip09g00462 801 MobiDBLite consensus disorder prediction 369 389 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 139 157 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 193 233 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 290 316 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 757 801 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 772 794 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 245 289 - -
Aip09g00462 801 PRINTS Proline rich extensin signature 253 278 - -
Aip09g00462 801 PRINTS Proline rich extensin signature 194 210 - -
Aip09g00462 801 PRINTS Proline rich extensin signature 211 228 - -
Aip09g00462 801 MobiDBLite consensus disorder prediction 138 398 - -
Aip09g00462 801 Gene3D HPT domain 1 65 IPR036641 GO:0000160
Aip09g00462 801 Coils Coil 340 360 - -
Aip09g00462 801 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 91 IPR036641 GO:0000160
Aip09g00462 801 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 602 800 IPR007133 GO:0006368|GO:0016570|GO:0016593
Aip09g00462 801 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 265 572 IPR007133 GO:0006368|GO:0016570|GO:0016593
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00462 Aip-Chr9 4865308 4873594 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00462 K15174 - gmx:100800148 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00462 09 4865308 4873594 Aip09g00462 09 4865308 4873594 ECH