Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00419 ATGGATAGGTTCTCCATAGATGAGGTCAATGAATTGGAGAGAATATATAAGGAGATGGGAGAAAAATCAGTTGACCAGAATTTCTGCAAGTCGGTTGCCATAAGTTTTAGTTCCTCATCAAGACGTGCTGGTAAAGCTTCTTTAACTTGGGAACAGGTGCGGCATTGGTTTCAAAATAAACTGAAAGAGTCAGAGACTAATGTTGCTTCCACTACCAGTTCAATGAACCTATATATCGATCTTTCGGAAGCATCCGTGTTAAGAAATGGGCAGAAAAGCTCCTCAAATGCAAAAGGCAAACGAGCAGAAGATATCTCAGAGTTGACATTTGAGGCAAGGTCTTCAAAAGATGTTGCATGGCATGATGTTGCATCATTCCTTAACTATAGAGTTTTGAGCACAGGCGAACTTGAAGTGCGTATTCGATATGCCGGATTTGGTAAGGAGCAGGATGAGTGGATTAATGTAAAAGAGGGGGTGCGTGAGAGATCCATCCCTTTAGAACCTTCAGAGTGTCACAAGGTCAACGATGGAGATCTTATACTGTGTTTCCTGGAAAAAGATGATTATGCGCTCTATGTTGATGCTCGTGTTGTCAGAGTCCTCAGAAGGCTCCATGGTCCTACAGACTGTAGGTGTATCTTCATTGTTCGTTATGTTCATGATAAAACTGAGGAAGGAGTTTCGTGGAACAGGTTATGCTGTAGACCTACACAAGAGGAACATGTCCCTGAAGAAATCCCCCTAAATCCCCTAGAGGACCTATGGGGATGA 774 0.4264 MDRFSIDEVNELERIYKEMGEKSVDQNFCKSVAISFSSSSRRAGKASLTWEQVRHWFQNKLKESETNVASTTSSMNLYIDLSEASVLRNGQKSSSNAKGKRAEDISELTFEARSSKDVAWHDVASFLNYRVLSTGELEVRIRYAGFGKEQDEWINVKEGVRERSIPLEPSECHKVNDGDLILCFLEKDDYALYVDARVVRVLRRLHGPTDCRCIFIVRYVHDKTEEGVSWNRLCCRPTQEEHVPEEIPLNPLEDLWG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00419 257 Gene3D - 105 166 - -
Aip09g00419 257 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 3 240 - -
Aip09g00419 257 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 3 240 IPR039276 -
Aip09g00419 257 Pfam SAWADEE domain 107 234 IPR032001 GO:0003682
Aip09g00419 257 Gene3D - 167 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00419 Aip-Chr9 4384415 4388643 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00419 - - gmx:100800332 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00419 09 4384415 4388643 Aip09g00419 09 4384415 4388643 ECH