Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00413 ATGGTGAGTGAAGAGAGGATACGAGGAGAGGAATCAAAGGTGGCAGCTTTGGAGAGCAGCGGAAGAATGAGCGGAGCCCCTGTCGGAGCACGGCAGCGGCGGAGGAAGGAGGCGGTGGAGCTGTGTCTGAGGTTGATGTGCATGGCTTCTTCCATTGTTGCAGTGTCTCTCATGGTTACTGCAAAACAAGCTACAAATGTCTCCATCTATGGCTTCAGCTTCCCCATTAATTCAAAGTGGTCCTTCTCTCAATCATACGAGTAA 264 0.5114 MVSEERIRGEESKVAALESSGRMSGAPVGARQRRRKEAVELCLRLMCMASSIVAVSLMVTAKQATNVSIYGFSFPINSKWSFSQSYE 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00413 87 PANTHER CASP-LIKE PROTEIN 3A2 4 87 - -
Aip09g00413 87 MobiDBLite consensus disorder prediction 1 33 - -
Aip09g00413 87 Pfam Casparian strip membrane protein domain 35 86 IPR006702 -
Aip09g00413 87 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 4 87 - -
Aip09g00413 87 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00413 Aip-Chr9 4289682 4289945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g00413 34 85 Miscellaneous Gene Families AT3G16300 46.154 1.38e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00413 - - gmx:100783028 112.464