Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00405 ATGGAATCGAGTCGAAGAGCTGTGGAGTCATATTGGAGGTCGAGGTTGATCGATTCAGCTACTTCGGATGAAGATAAGGTCACTCCGGTTTACAAATTGGAGGAAATCTGCGATCTTTTGAGGACATCGCATGTTAGTATTGTGAAGGAGCTTTCAGAGTTTGTGTTGAAGAGACTCGATCATAAGAGCCCAATTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATTGTGTTGGAAAATCTGGTGTAGAGTTTAGAAGGGAAATGCAGAGACATTCGGTGGCAGTTCGTCAATTGTTTCATTACAAGGGACAGTTGGATCCTTTGAAAGGTGATGCACTAAATAAGGCTGTGCGAGACACGGCTCATGAGGCTATCTCTGCCATCTTTTCAGAAGAAAATAAGCCAGTGGCAGCGCCTACTGAAGATATTAACAGGCGAATACAAGGGTTTGGGAATACAAACTATGAACCACCATCAGAAGATAAGAAATCTTTTATTAGTGAGGTAGTCGGTATTGGAAGTGCATCAATTAAGCAAGGACTTAGTAGCTTAACACAGGGACATTCACTAATGAAGAATGATACTGGAAGCTACAGGAGTCCAAATCTTCGAAGGTCATTGACCATAGAAGAAGAACGTGGTGAGAGATATGAACCGGTTAAATACCGAAATGAAAATCAGAGTAGTTTTGAGCTTCCAAAGTCCAGTGGTCCTTGGAGTCAGGATTCAAGGGTAACTAAGACGGAAACATCAAATGGTGATTCTGGTGCAAGTTATTCGGAAGGTAAGACAAGGGAGGATAGGTTGCTGGAGACAATTGTAACTTCAGGGGGTATTCGGCTACAACCCACTCGAGATGCTATTCAAGTTTTTCTAACAGAGGCTGCCAAGTTGGATGCTGTGGCTTTATGTCATGCCCTTGAACCAAAGCTTCAATCTCCCATGTGGCAGGTTCGCATGAAAGCTGTTTGCGTGCTCGAAGCCATGCTTAGAAAGAAGGATGATGATCATTTTTCAGTTGTTTTTTCTTACTTCACTGAAAATAGTGATGCAGTGGTGAAATGTTCAGAATCTCCCCAATCTTCTTTGAGGGAAAAGGCAGTCAGGGTTATTGGGCTTCTAGGTGTAGGCCACTCAAATAGCTTTGGTATTAATTCAGAGAAGGCCGTGAAGACAGAAAGTACTACTGCTGTTGAGTTGCCTGACTTGATTGACACTGGAGATTCAAATGATAATCTCGAAATGGAGAATACTACAAAGAATGTGCTTGATCAGAATATAGAAAATTTGACATCATCCAGACCTCCTCTCGTTGATGATTTATTTGGAGATTTTAGTGGTTCTGTTGGAGCTACTAATGAACCAAAAAATGATGACGACCCTTTTGCTGGTGTATCATTTCATACAAGTGAGAAGAAAGAACATGCAGCTGATCTCTTTTCCGGGATGGATGTTGGTGGTGATAAACCAGTTGATCATGGAAGTCGTGGACAGACAAGTAGGAGTGATCCCCAACCCTTTGACCTCTTTGCTTCCAATCCCGAGCAAACAAATCATAAAGAATTTGTTGGTGATTTAATGGGTGGCTTGTCATTAGAGGAAAATACCTCAAGTTCAAATCATAAACCATCTCCCCCTGCGACAACAATGCAATCGGAATCTTTATTTTCGGGTTTAAATAGTCAGGTTCCAGATAATAATTTAGGTGGCATGTTGGGTTCTCAGACAGTTGGGTTCAATGTAAATCCCATGTTTCCTACGGGTCAGCTGCCTTATGGTGTGCAACCCGGTATGATGTTGAACCACCCGTATGCTTCTCAGCCCTTTAATTATGGTGCCATGGGGACTCTCTTGGCTCAGCAGCAACTCCTTGCAACAATGGCTAATTTCCAACACCTTAATAATGCCAACATGCAAAATGCTAGTGCTGCTCAAATGACTGGACCCAATGGAAGTACACCTCTTCCCGATATATTTCAACCAAATTTCTCAAACCAACCTCCTACCTCACTGATGAACAATTCAAAGAAAGAAGATACTAAAGCATTTGACTTTATCTCGGACCACATTGCTTCTGCCCGTGATTCAAGGAGAGTGATTTGA 2106 0.4202 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEICDLLRTSHVSIVKELSEFVLKRLDHKSPIVKQKALRLIKYCVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEENKPVAAPTEDINRRIQGFGNTNYEPPSEDKKSFISEVVGIGSASIKQGLSSLTQGHSLMKNDTGSYRSPNLRRSLTIEEERGERYEPVKYRNENQSSFELPKSSGPWSQDSRVTKTETSNGDSGASYSEGKTREDRLLETIVTSGGIRLQPTRDAIQVFLTEAAKLDAVALCHALEPKLQSPMWQVRMKAVCVLEAMLRKKDDDHFSVVFSYFTENSDAVVKCSESPQSSLREKAVRVIGLLGVGHSNSFGINSEKAVKTESTTAVELPDLIDTGDSNDNLEMENTTKNVLDQNIENLTSSRPPLVDDLFGDFSGSVGATNEPKNDDDPFAGVSFHTSEKKEHAADLFSGMDVGGDKPVDHGSRGQTSRSDPQPFDLFASNPEQTNHKEFVGDLMGGLSLEENTSSSNHKPSPPATTMQSESLFSGLNSQVPDNNLGGMLGSQTVGFNVNPMFPTGQLPYGVQPGMMLNHPYASQPFNYGAMGTLLAQQQLLATMANFQHLNNANMQNASAAQMTGPNGSTPLPDIFQPNFSNQPPTSLMNNSKKEDTKAFDFISDHIASARDSRRVI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00405 701 PANTHER UNCHARACTERIZED 1 694 IPR039273 -
Aip09g00405 701 Pfam ENTH domain 16 129 IPR013809 -
Aip09g00405 701 SUPERFAMILY ARM repeat 33 391 IPR016024 -
Aip09g00405 701 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Aip09g00405 701 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Aip09g00405 701 MobiDBLite consensus disorder prediction 531 553 - -
Aip09g00405 701 MobiDBLite consensus disorder prediction 187 265 - -
Aip09g00405 701 MobiDBLite consensus disorder prediction 532 553 - -
Aip09g00405 701 MobiDBLite consensus disorder prediction 224 260 - -
Aip09g00405 701 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Aip09g00405 701 MobiDBLite consensus disorder prediction 481 508 - -
Aip09g00405 701 MobiDBLite consensus disorder prediction 187 205 - -
Aip09g00405 701 MobiDBLite consensus disorder prediction 446 466 - -
Aip09g00405 701 Gene3D - 2 139 IPR008942 -
Aip09g00405 701 MobiDBLite consensus disorder prediction 206 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00405 - - gmx:100803368 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00405 09 4202969 4206965 Aip09g00405 09 4202969 4206965 ECH